Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq171037 179 8e-40 seq32333 178 3e-39 >seq171037 Length=1136 Score = 179 bits (198), Expect = 8e-40 Identities = 169/214 (79%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| |||||||| |||||||| |||||||||||||| | || || || ||||||||| Sbjct 769 ACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCG 710 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || || || ||||| | |||||| || || ||||| ||||| ||||||||| Sbjct 709 AGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 650 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108 || || ||| |||||||| || ||||| |||| ||||||||||| |||| ||| Sbjct 649 ATCTTCGACTTTACGTTCTCTATTGTGTC---ACTTGATTCCACTTCAAGAGTAATTGTC 593 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||||| |||| ||||| || || | |||||||| Sbjct 592 TTTCCAGTCAGTGTTTTGACAAATATTTGCATTT 559 >seq32333 Length=4216 Score = 178 bits (196), Expect = 3e-39 Identities = 168/213 (79%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| |||||||| |||||||| |||||||||||||| | || || || ||||||||| Sbjct 4007 ACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCG 4066 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || || || || || || ||||| | |||||| || || ||||| ||||| ||||||||| Sbjct 4067 AGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 4126 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| |||||||| || ||||| ||| |||||||||||| |||| ||| Sbjct 4127 ATCTTCGACTTTACGTTCTCTATTGTGTC---ACTTGATTCCACTTCAAGAGTAATTGTC 4183 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| |||| ||||| || || | ||||||| Sbjct 4184 TTTCCAGTCAGTGTTTTGACAAATATTTGCATT 4216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1104983928709266