Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 179 8e-40
seq32333 178 3e-39
>seq171037
Length=1136
Score = 179 bits (198), Expect = 8e-40
Identities = 169/214 (79%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| |||||||| |||||||| |||||||||||||| | || || || |||||||||
Sbjct 769 ACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCG 710
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| || || || || || ||||| | |||||| || || ||||| ||||| |||||||||
Sbjct 709 AGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 650
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTC 195108
|| || ||| |||||||| || ||||| |||| ||||||||||| |||| |||
Sbjct 649 ATCTTCGACTTTACGTTCTCTATTGTGTC---ACTTGATTCCACTTCAAGAGTAATTGTC 593
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
||||| |||| ||||| || || | ||||||||
Sbjct 592 TTTCCAGTCAGTGTTTTGACAAATATTTGCATTT 559
>seq32333
Length=4216
Score = 178 bits (196), Expect = 3e-39
Identities = 168/213 (79%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| |||||||| |||||||| |||||||||||||| | || || || |||||||||
Sbjct 4007 ACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCG 4066
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| || || || || || ||||| | |||||| || || ||||| ||||| |||||||||
Sbjct 4067 AGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGA 4126
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108
|| || ||| |||||||| || ||||| ||| |||||||||||| |||| |||
Sbjct 4127 ATCTTCGACTTTACGTTCTCTATTGTGTC---ACTTGATTCCACTTCAAGAGTAATTGTC 4183
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||||| |||| ||||| || || | |||||||
Sbjct 4184 TTTCCAGTCAGTGTTTTGACAAATATTTGCATT 4216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1104983928709266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |