Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq75644 242 4e-59 seq110960 232 7e-56 seq150668 230 3e-55 seq93010 206 3e-48 >seq75644 Length=2520 Score = 242 bits (268), Expect = 4e-59 Identities = 607/911 (67%), Gaps = 41/911 (5%) Strand=Plus/Plus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 |||||| ||||| |||| | || |||||||| || ||||| ||||| | || ||| Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 |||||||||||||| ||||| | |||| | || || | | | || | || |||| Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTATAG 702 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 | | ||| || ||||||| | || | |||||||||||| ||||| || || | Sbjct 703 CAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAG 762 Query 18849 TTTAACAGGTAGTGCATCTGTAA-GAAATTCTTGTTCTATATTTACTGCCTC--TGATAT 18905 ||| || |||| || || ||| |||| ||| |||||| | | |||||| ||| || Sbjct 763 TTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGA-AT 820 Query 18906 AATAG-ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATG 18964 | ||| ||| ||| | || | || || | | | |||||| |||| | || | Sbjct 821 A-TAGCATA-AACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAG 878 Query 18965 CAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAG 19024 |||| || || || || ||||| | ||| || | |||||| || || || || | Sbjct 879 CAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTG 938 Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084 ||||||| || | || || | ||| |||||||| ||||| || |||||||| | | Sbjct 939 GCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTC 998 Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCC 19144 |||| | ||| ||||| || | | | || || | | | | ||| | ||||| Sbjct 999 CTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCC 1058 Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACACA--------------TGGCATTG---- 19186 | | || ||||| | ||||| || | |||||| ||||||| Sbjct 1059 AGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTTGTGATGGCATTAAACA 1118 Query 19187 -----TCTCTATAGAA--TTAAAT----AGATACATACGCT-CATCTGTATCTTTAACAT 19234 |||||| |||| ||| || | |||||||| | | ||| |||| | || Sbjct 1119 AGAAATCTCTA-AGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATAT 1177 Query 19235 ATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATC 19294 ||| ||| |||| | || ||||| || || |||||||||||||| |||||||| | | Sbjct 1178 ATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGC 1237 Query 19295 CGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTT 19354 ||||||| |||| | || | || || ||||| || ||| | ||| |||| ||||| Sbjct 1238 CGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTT 1297 Query 19355 CATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTT 19414 | || ||||||||||| || || || || || | || | ||||||||| | Sbjct 1298 CCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCT 1357 Query 19415 CATCTGAGGTTAA-TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACT 19473 | ||| | |||| || || ||| | ||| ||||| || ||||| || ||||||||| Sbjct 1358 CTCCTG-GCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACT 1416 Query 19474 GTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGA 19533 | ||| || ||||| | || ||||| || | | ||| ||||| ||||||| || || Sbjct 1417 GACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGC 1476 Query 19534 AATATAACAAA 19544 ||||| ||||| Sbjct 1477 AATATCACAAA 1487 >seq110960 Length=1818 Score = 232 bits (256), Expect = 7e-56 Identities = 605/912 (66%), Gaps = 42/912 (5%) Strand=Plus/Minus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 |||||| ||||| |||| | || |||||||| || ||||| ||||| | || ||| Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 |||||||||||||| ||||| | |||| | || || | | | || | || | || Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTACAG 1117 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848 | | ||| || ||||||| | || | |||||||||||| ||||| || || | Sbjct 1116 CAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATCAG 1057 Query 18849 TTTAACAGGTAGTGCATCTGTAA-GAAATTCTTGTTCTATATTTACTGCCTC--TGATAT 18905 ||| || |||| || || ||| |||| ||| |||||| | | |||||| ||| || Sbjct 1056 TTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGA-AT 999 Query 18906 AATAG-ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATG 18964 | ||| ||| ||| | || | || || | | | |||||| |||| | || | Sbjct 998 A-TAGCATA-AACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAG 941 Query 18965 CAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAG 19024 |||| || || || || ||||| | ||| || | |||||| || || || || | Sbjct 940 CAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTG 881 Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084 ||||||| || | || || | ||| |||||||| ||||| || |||||||| | | Sbjct 880 GCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTC 821 Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCC 19144 |||| | ||| ||||| || | | | || || | | | | ||| | ||||| Sbjct 820 CTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCC 761 Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACACA--------------TGGCATTG---- 19186 | | || ||||| | ||||| || | |||||| ||||||| Sbjct 760 AGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTCGTGATGGCATTAAACA 701 Query 19187 -----TCTCTATAGAA---TTAAAT----AGATACATACGCT-CATCTGTATCTTTAACA 19233 |||||| |||| ||| || | |||||||| | | ||| |||| | | Sbjct 700 AGAAATCTCTA-AGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATA 642 Query 19234 TATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAAT 19293 || | ||| |||| | || ||||| || ||||||||||||||||| |||||||| | Sbjct 641 TACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCATG 582 Query 19294 CCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTT 19353 |||||||| |||| | || | || || ||||| || ||| | ||| |||| |||| Sbjct 581 CCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTT 522 Query 19354 TCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTT 19413 || || ||||||||||| || || || || || | || | ||||||||| Sbjct 521 TCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGC 462 Query 19414 TCATCTGAGGTTAA-TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAAC 19472 || ||| | |||| || || ||| | ||| ||||| || ||||| || |||||||| Sbjct 461 TCTCCTG-GCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAAC 403 Query 19473 TGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGG 19532 || ||| || ||||| | || ||||| || | | ||| ||||| ||||||| || || Sbjct 402 TGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGG 343 Query 19533 AAATATAACAAA 19544 ||||| || || Sbjct 342 CAATATCACGAA 331 >seq150668 Length=1318 Score = 230 bits (254), Expect = 3e-55 Identities = 599/911 (66%), Gaps = 48/911 (5%) Strand=Plus/Minus Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732 || |||||| |||| | || || || ||||| ||||| ||||| | |||||| |||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGT 18792 ||||||||||| ||||||| || | || || ||| | || | ||| | || || Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 18793 CTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTA 18852 | ||| || ||||| | || || ||| | | | |||||||| || || | | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 18853 ACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTC-----TGATATAA 18907 || || | ||||| || ||||||||||| || || ||||||||||| | ||| || Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 18908 TAGATACAACTCTATCTTC---ATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATG 18964 | ||| | || | ||||| || | | | | ||| ||||| | | || | Sbjct 923 TGGAT-CCTCT-TCTCTTCCGGTTTTGCA------ATGATATGCTTAAATAGGAGGCAAG 872 Query 18965 CAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAG 19024 | ||||| ||||| |||||||| |||| |||||| | ||||| || || | || | Sbjct 871 CGAAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGG 812 Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084 |||| || || | ||||| | ||| ||||| | ||||| || || ||||| | || Sbjct 811 GCATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACAC 752 Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCC 19144 ||||||| ||||||||||| | | | ||| | || || ||| ||||| Sbjct 751 CTTCTACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCC 692 Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACAC--------------ATGGCATT----- 19185 | | || ||||| | ||||| ||| | || | || ||||| Sbjct 691 AGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCA 632 Query 19186 ----GTCTCTATAGAATTAAATAGAT------ACATAC-GCTCATCTGTATCTTTAACAT 19234 ||| ||| | || ||| | || || ||| ||| | | |||| | | | Sbjct 631 AAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGT 572 Query 19235 ATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATC 19294 | | ||| || | | | ||||||||| ||||| ||||| || ||||| || || | | Sbjct 571 AAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGC 512 Query 19295 CGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTT 19354 | |||||||| | |||||| ||||| ||||| | ||| | |||| | ||||| Sbjct 511 CATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTCGATAAGATTTT 452 Query 19355 CATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTT 19414 | |||||| ||||||||||| || |||||||| | || | | ||| || | Sbjct 451 CCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCT 392 Query 19415 CATCTGAGGTTAA-TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACT 19473 | || | |||| || |||||||| | || |||||||| ||||| ||||| || ||| Sbjct 391 C-TCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACT 333 Query 19474 GTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGA 19533 ||||| || |||||| | ||||| ||||| | ||||| || ||| |||| | || ||| Sbjct 332 GTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGA 273 Query 19534 AATATAACAAA 19544 || || ||||| Sbjct 272 AACATTACAAA 262 >seq93010 Length=2134 Score = 206 bits (228), Expect = 3e-48 Identities = 412/603 (68%), Gaps = 12/603 (2%) Strand=Plus/Minus Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAA-ATCCCTAGTTCTTAGTTCTTCAT 48270 |||||| | ||| || |||||||| || ||||| || |||||||| | | ||||| Sbjct 738 CATAAACAGATCGGGGATCCAAAGGGC-ATAAAAAAGATCCCTAGCACGAACCTCTTCTG 680 Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 ||| | ||| | | ||| | ||| | || || | ||||||||| || | || Sbjct 679 CACCAGTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGAT 620 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 | || || | |||| || | | ||||| || ||||| | || | |||||||||| Sbjct 619 AGATGGCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGT 560 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450 || |||| | ||||||||| |||| ||||| || |||||| || || | |||||| Sbjct 559 TAAAAACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGG 500 Query 48451 TTCCACTAGCTCTTAT---ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATA 48507 | ||| | | | ||| || | | || | ||| ||||| || || ||||||| | Sbjct 499 TACCAGTGCCGCGTATGCAATGAACATTT---ACACCAATACCCCCAGCACTTTTAGAAA 443 Query 48508 TTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTA 48567 | || ||||| | || ||||||||||| || || || || ||||| |||| | | Sbjct 442 TAAGGGCACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGA 383 Query 48568 ATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATG 48627 |||||||| || ||||| || || || || |||||||| | || || || | Sbjct 382 CAAGAAAACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAG 323 Query 48628 CATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-C 48686 | ||| ||||||| ||| || | ||| || || |||||| || | ||||| || Sbjct 322 CGTGAGTAAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCAT 263 Query 48687 CATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTG 48746 || | || ||||| || || || | ||| | ||||| ||||| | |||| || ||| Sbjct 262 CAAAG-TGAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTA 204 Query 48747 TTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TG 48804 |||| ||||| | ||||||||| | |||||||| ||||| ||||| || ||||| || Sbjct 203 TTATCGATTTTAAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTG 144 Query 48805 AAA 48807 ||| Sbjct 143 AAA 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559885673748720