Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq75644 242 4e-59
seq110960 232 7e-56
seq150668 230 3e-55
seq93010 206 3e-48
>seq75644
Length=2520
Score = 242 bits (268), Expect = 4e-59
Identities = 607/911 (67%), Gaps = 41/911 (5%)
Strand=Plus/Plus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
|||||| ||||| |||| | || |||||||| || ||||| ||||| | || |||
Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
|||||||||||||| ||||| | |||| | || || | | | || | || ||||
Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTATAG 702
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
| | ||| || ||||||| | || | |||||||||||| ||||| || || |
Sbjct 703 CAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAG 762
Query 18849 TTTAACAGGTAGTGCATCTGTAA-GAAATTCTTGTTCTATATTTACTGCCTC--TGATAT 18905
||| || |||| || || ||| |||| ||| |||||| | | |||||| ||| ||
Sbjct 763 TTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGA-AT 820
Query 18906 AATAG-ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATG 18964
| ||| ||| ||| | || | || || | | | |||||| |||| | || |
Sbjct 821 A-TAGCATA-AACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAG 878
Query 18965 CAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAG 19024
|||| || || || || ||||| | ||| || | |||||| || || || || |
Sbjct 879 CAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTG 938
Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084
||||||| || | || || | ||| |||||||| ||||| || |||||||| | |
Sbjct 939 GCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTC 998
Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCC 19144
|||| | ||| ||||| || | | | || || | | | | ||| | |||||
Sbjct 999 CTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCC 1058
Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACACA--------------TGGCATTG---- 19186
| | || ||||| | ||||| || | |||||| |||||||
Sbjct 1059 AGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTTGTGATGGCATTAAACA 1118
Query 19187 -----TCTCTATAGAA--TTAAAT----AGATACATACGCT-CATCTGTATCTTTAACAT 19234
|||||| |||| ||| || | |||||||| | | ||| |||| | ||
Sbjct 1119 AGAAATCTCTA-AGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATAT 1177
Query 19235 ATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATC 19294
||| ||| |||| | || ||||| || || |||||||||||||| |||||||| | |
Sbjct 1178 ATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGC 1237
Query 19295 CGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTT 19354
||||||| |||| | || | || || ||||| || ||| | ||| |||| |||||
Sbjct 1238 CGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTT 1297
Query 19355 CATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTT 19414
| || ||||||||||| || || || || || | || | ||||||||| |
Sbjct 1298 CCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCT 1357
Query 19415 CATCTGAGGTTAA-TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACT 19473
| ||| | |||| || || ||| | ||| ||||| || ||||| || |||||||||
Sbjct 1358 CTCCTG-GCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACT 1416
Query 19474 GTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGA 19533
| ||| || ||||| | || ||||| || | | ||| ||||| ||||||| || ||
Sbjct 1417 GACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGC 1476
Query 19534 AATATAACAAA 19544
||||| |||||
Sbjct 1477 AATATCACAAA 1487
>seq110960
Length=1818
Score = 232 bits (256), Expect = 7e-56
Identities = 605/912 (66%), Gaps = 42/912 (5%)
Strand=Plus/Minus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
|||||| ||||| |||| | || |||||||| || ||||| ||||| | || |||
Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
|||||||||||||| ||||| | |||| | || || | | | || | || | ||
Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTACAG 1117
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
| | ||| || ||||||| | || | |||||||||||| ||||| || || |
Sbjct 1116 CAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATCAG 1057
Query 18849 TTTAACAGGTAGTGCATCTGTAA-GAAATTCTTGTTCTATATTTACTGCCTC--TGATAT 18905
||| || |||| || || ||| |||| ||| |||||| | | |||||| ||| ||
Sbjct 1056 TTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGA-AT 999
Query 18906 AATAG-ATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATG 18964
| ||| ||| ||| | || | || || | | | |||||| |||| | || |
Sbjct 998 A-TAGCATA-AACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAG 941
Query 18965 CAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAG 19024
|||| || || || || ||||| | ||| || | |||||| || || || || |
Sbjct 940 CAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTG 881
Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084
||||||| || | || || | ||| |||||||| ||||| || |||||||| | |
Sbjct 880 GCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTC 821
Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCC 19144
|||| | ||| ||||| || | | | || || | | | | ||| | |||||
Sbjct 820 CTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATCC 761
Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACACA--------------TGGCATTG---- 19186
| | || ||||| | ||||| || | |||||| |||||||
Sbjct 760 AGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTCGTGATGGCATTAAACA 701
Query 19187 -----TCTCTATAGAA---TTAAAT----AGATACATACGCT-CATCTGTATCTTTAACA 19233
|||||| |||| ||| || | |||||||| | | ||| |||| | |
Sbjct 700 AGAAATCTCTA-AGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATA 642
Query 19234 TATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAAT 19293
|| | ||| |||| | || ||||| || ||||||||||||||||| |||||||| |
Sbjct 641 TACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCATG 582
Query 19294 CCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTT 19353
|||||||| |||| | || | || || ||||| || ||| | ||| |||| ||||
Sbjct 581 CCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTT 522
Query 19354 TCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTT 19413
|| || ||||||||||| || || || || || | || | |||||||||
Sbjct 521 TCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGC 462
Query 19414 TCATCTGAGGTTAA-TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAAC 19472
|| ||| | |||| || || ||| | ||| ||||| || ||||| || ||||||||
Sbjct 461 TCTCCTG-GCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAAC 403
Query 19473 TGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGG 19532
|| ||| || ||||| | || ||||| || | | ||| ||||| ||||||| || ||
Sbjct 402 TGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGG 343
Query 19533 AAATATAACAAA 19544
||||| || ||
Sbjct 342 CAATATCACGAA 331
>seq150668
Length=1318
Score = 230 bits (254), Expect = 3e-55
Identities = 599/911 (66%), Gaps = 48/911 (5%)
Strand=Plus/Minus
Query 18673 TGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACATTCC 18732
|| |||||| |||| | || || || ||||| ||||| ||||| | |||||| ||||
Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104
Query 18733 ATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGTAGT 18792
||||||||||| ||||||| || | || || ||| | || | ||| | || ||
Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044
Query 18793 CTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAATTTA 18852
| ||| || ||||| | || || ||| | | | |||||||| || || | |
Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984
Query 18853 ACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTC-----TGATATAA 18907
|| || | ||||| || ||||||||||| || || ||||||||||| | ||| ||
Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924
Query 18908 TAGATACAACTCTATCTTC---ATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATG 18964
| ||| | || | ||||| || | | | | ||| ||||| | | || |
Sbjct 923 TGGAT-CCTCT-TCTCTTCCGGTTTTGCA------ATGATATGCTTAAATAGGAGGCAAG 872
Query 18965 CAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAG 19024
| ||||| ||||| |||||||| |||| |||||| | ||||| || || | || |
Sbjct 871 CGAAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGG 812
Query 19025 GCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATAC 19084
|||| || || | ||||| | ||| ||||| | ||||| || || ||||| | ||
Sbjct 811 GCATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACAC 752
Query 19085 CTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCC 19144
||||||| ||||||||||| | | | ||| | || || ||| |||||
Sbjct 751 CTTCTACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCC 692
Query 19145 ATTTCAGTGCCCAATCAGCCTTCTTTTTTACAC--------------ATGGCATT----- 19185
| | || ||||| | ||||| ||| | || | || |||||
Sbjct 691 AGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCA 632
Query 19186 ----GTCTCTATAGAATTAAATAGAT------ACATAC-GCTCATCTGTATCTTTAACAT 19234
||| ||| | || ||| | || || ||| ||| | | |||| | | |
Sbjct 631 AAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGT 572
Query 19235 ATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATC 19294
| | ||| || | | | ||||||||| ||||| ||||| || ||||| || || | |
Sbjct 571 AAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGC 512
Query 19295 CGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTT 19354
| |||||||| | |||||| ||||| ||||| | ||| | |||| | |||||
Sbjct 511 CATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTCGATAAGATTTT 452
Query 19355 CATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTT 19414
| |||||| ||||||||||| || |||||||| | || | | ||| || |
Sbjct 451 CCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCT 392
Query 19415 CATCTGAGGTTAA-TGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACT 19473
| || | |||| || |||||||| | || |||||||| ||||| ||||| || |||
Sbjct 391 C-TCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACT 333
Query 19474 GTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGA 19533
||||| || |||||| | ||||| ||||| | ||||| || ||| |||| | || |||
Sbjct 332 GTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGA 273
Query 19534 AATATAACAAA 19544
|| || |||||
Sbjct 272 AACATTACAAA 262
>seq93010
Length=2134
Score = 206 bits (228), Expect = 3e-48
Identities = 412/603 (68%), Gaps = 12/603 (2%)
Strand=Plus/Minus
Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAA-ATCCCTAGTTCTTAGTTCTTCAT 48270
|||||| | ||| || |||||||| || ||||| || |||||||| | | |||||
Sbjct 738 CATAAACAGATCGGGGATCCAAAGGGC-ATAAAAAAGATCCCTAGCACGAACCTCTTCTG 680
Query 48271 TGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330
||| | ||| | | ||| | ||| | || || | ||||||||| || | ||
Sbjct 679 CACCAGTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGAT 620
Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390
| || || | |||| || | | ||||| || ||||| | || | ||||||||||
Sbjct 619 AGATGGCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGT 560
Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450
|| |||| | ||||||||| |||| ||||| || |||||| || || | ||||||
Sbjct 559 TAAAAACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGG 500
Query 48451 TTCCACTAGCTCTTAT---ATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATA 48507
| ||| | | | ||| || | | || | ||| ||||| || || ||||||| |
Sbjct 499 TACCAGTGCCGCGTATGCAATGAACATTT---ACACCAATACCCCCAGCACTTTTAGAAA 443
Query 48508 TTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTA 48567
| || ||||| | || ||||||||||| || || || || ||||| |||| | |
Sbjct 442 TAAGGGCACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGA 383
Query 48568 ATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATG 48627
|||||||| || ||||| || || || || |||||||| | || || || |
Sbjct 382 CAAGAAAACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAG 323
Query 48628 CATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATC-C 48686
| ||| ||||||| ||| || | ||| || || |||||| || | ||||| ||
Sbjct 322 CGTGAGTAAACCACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCCTCTATGTCAT 263
Query 48687 CATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTG 48746
|| | || ||||| || || || | ||| | ||||| ||||| | |||| || |||
Sbjct 262 CAAAG-TGAATACCAATTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTA 204
Query 48747 TTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TG 48804
|||| ||||| | ||||||||| | |||||||| ||||| ||||| || ||||| ||
Sbjct 203 TTATCGATTTTAAGAAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAATTGTAGTTG 144
Query 48805 AAA 48807
|||
Sbjct 143 AAA 141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559885673748720
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