Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq150668 210 3e-49 seq75644 156 5e-33 seq110960 138 1e-27 >seq150668 Length=1318 Score = 210 bits (232), Expect = 3e-49 Identities = 593/908 (65%), Gaps = 42/908 (5%) Strand=Plus/Minus Query 36888 TGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCC 36947 || ||||| ||||| || | ||||||||||| || || || || || |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 36948 ATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGAAGC 37007 ||||||||||| ||||| | || | || | | | | ||| |||||| Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 37008 CTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTAGTTTT 37067 | ||| || ||||| |||||||| |||||| || | | || || ||||| || | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 37068 ACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTATATTA 37127 || || | ||||| |||||| || || ||| |||| || || | | |||| | Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 37128 ACAATAACTTCTTCAGTTGGGGGATATTTTAA--ATAT--TTAAACAATAAACATGCAAA 37183 || | ||||| || || | || || |||| ||||| | | || || || Sbjct 923 TGGAT--CCTCTTCTCTTCCGG--TTTTGCAATGATATGCTTAAATAGGAGGCAAGCGAA 868 Query 37184 ATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCAT 37243 ||| ||||| | || ||||||| |||||| | ||||| ||||| | || ||||| Sbjct 867 ATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCAT 808 Query 37244 TAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTC 37303 | ||| | ||||||| ||||||||| || ||||| || || ||||||| |||||| Sbjct 807 AAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCTTC 748 Query 37304 AACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAttt 37363 || |||||||| ||| | | |||| | ||| | ||| | ||| |||||| | Sbjct 747 TACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCCAGTC 688 Query 37364 ttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAA 37423 | ||| | |||||| | | || || || | | | ||||| || | | ||| Sbjct 687 GAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAAAAA 628 Query 37424 Gt----------------------------tt--ttttCTTCACTATCTGTTATATAAGT 37453 || || ||||| || |||| | || ||||| Sbjct 627 GTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGTAAGT 568 Query 37454 ATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATA 37513 |||||| || | | ||||||||||| || ||||| |||||||| || || | ||||| Sbjct 567 ATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGCCATA 508 Query 37514 AAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG-TTTTCAT 37572 |||||| | | |||| | | ||||| || | ||||| || | |||| ||||| Sbjct 507 AAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATTTTCCA 449 Query 37573 TAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCAT 37632 |||||||||||||||||| || || || |||||||| || || ||| ||| || | Sbjct 448 AAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCTC-T 390 Query 37633 CATTTGATAA-TTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTC 37691 | ||| | ||||||| | || ||||| || ||||||||||| || || ||| Sbjct 389 CCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTGTC 330 Query 37692 CAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAAT 37751 || || |||| || ||||| | ||||||| ||| || | || ||||| Sbjct 329 CAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAAAC 270 Query 37752 ATTACAAA 37759 |||||||| Sbjct 269 ATTACAAA 262 >seq75644 Length=2520 Score = 156 bits (172), Expect = 5e-33 Identities = 587/912 (64%), Gaps = 43/912 (5%) Strand=Plus/Plus Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 |||||| ||||| ||||| || | || || || ||||| || || || | || ||||| Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642 Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAAT--TCCTTC 37001 |||||||||||||| ||||| | ||| | || | || | | | | || | Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTT-CT-CGTAACCAAGCTCGTAT 700 Query 37002 AGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATT 37061 || | | ||| ||||||||||| | ||| ||||| | ||| |||| || ||||| Sbjct 701 AGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATC 760 Query 37062 AGTTTTACTGGAATTGCATC-TTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAAC 37120 |||||||| || | || || || |||||| |||| |||| | || || || | Sbjct 761 AGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTTTT-CTATCTCCAATGCCTCCTTGAA 819 Query 37121 TATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATAT--TTAAACAATAAACAT 37178 |||| | || | ||| | | | ||| | || |||| || |||| | || Sbjct 820 TATAGCATAAACACGTTCCTTA--TCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAA 877 Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||| || || | ||||| || | ||| || | |||||| ||||| || ||| Sbjct 878 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 937 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 ||||| | || | || |||| ||||||||| | |||||| || |||||||| | Sbjct 938 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 997 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC 37358 ||||| | ||| ||||| ||| ||| ||| | || ||||| | |||| |||| Sbjct 998 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATC 1057 Query 37359 CAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAG 37418 || | | ||| | |||||| | ||||| || | || || || || || Sbjct 1058 CAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTTGTGATGGCATTAAAC 1117 Query 37419 A------------GAAAGtt---ttt------------ttCTTCACT--ATCTGTTATAT 37449 | |||| || ||| || | |||| |||| |||| Sbjct 1118 AAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATAT 1177 Query 37450 AAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAAC 37509 | |||||||| || | || |||||| || |||||||||||||| || || ||||| | | Sbjct 1178 ATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGC 1237 Query 37510 CATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTT 37569 | ||||| || | | || | || |||||| || | | ||||| | | | |||| Sbjct 1238 CGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTT 1297 Query 37570 CATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT 37629 | || || |||||||| || || |||||||| ||||| || ||||||||||| | Sbjct 1298 CCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCT 1357 Query 37630 CATCATTTGATAATTTTTTCCAAT--CATTAATATCTTTTGATAAATCAACTTCATCAAC 37687 | || | ||| | ||| || || ||| ||||| || |||||||| || ||||| Sbjct 1358 C-TCCTGGCTTAAGTGCATCCCATTGCA-CAATGTCTTTGGACAAATCAACCTCTTCAAC 1415 Query 37688 GGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGG 37747 | ||| || || | || ||| || | ||| ||||| || ||| ||||| Sbjct 1416 TGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGG 1475 Query 37748 AAATATTACAAA 37759 ||||| ||||| Sbjct 1476 CAATATCACAAA 1487 >seq110960 Length=1818 Score = 138 bits (152), Expect = 1e-27 Identities = 586/915 (64%), Gaps = 48/915 (5%) Strand=Plus/Minus Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 |||||| ||||| ||||| || | || || || || || || || || | || ||||| Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177 Query 36944 TTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAAT--TCCTTC 37001 |||||||||||||| ||||| | ||| | || | || | | | | || | | Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTT-CT-CGTAACCAAGCTCGTAC 1119 Query 37002 AGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATT 37061 || | | ||| ||||||||||| | ||| ||||| | ||| |||| || ||||| Sbjct 1118 AGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATC 1059 Query 37062 AGTTTTACTGGAATTGCATC-TTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAAC 37120 ||||| || || | || || || |||||| |||| |||| | || || || | Sbjct 1058 AGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTTTT-CTATCTCCAATGCCTCCTTGAA 1000 Query 37121 TATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATAT--TTAAACAATAAACAT 37178 |||| | || | ||| | | | ||| | || |||| || |||| | || Sbjct 999 TATAGCATAAACACGTTCCTTA--TCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAA 942 Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||| || || | ||||| || | ||| || | |||||| ||||| || ||| Sbjct 941 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 882 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298 ||||| | || | || |||| ||||||||| | |||||| || |||||||| | Sbjct 881 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 822 Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC 37358 ||||| | ||| ||||| ||| ||| ||| | || ||||| | |||| |||| Sbjct 821 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATC 762 Query 37359 CAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA--ATTGCTTT-- 37414 || | | ||| | |||||| | ||||| || | | ||| || || || Sbjct 761 CAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGA--GGTTCGTGATGGCATTAA 704 Query 37415 ------------TAAGAGAA---AGttttt-----------ttCTTCACT--ATCTGTTA 37446 ||||| || || ||| || | |||| |||| | Sbjct 703 ACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGA 644 Query 37447 TATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAA 37506 |||| |||||||| || | || |||||| || || ||||||||||| || || ||||| | Sbjct 643 TATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCA 584 Query 37507 AACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGT 37566 || ||||| || | | || | || |||||| || | | ||||| | | | | Sbjct 583 TGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGAT 524 Query 37567 TTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTC 37626 |||| || || |||||||| || || |||||||| ||||| || ||||||||||| Sbjct 523 TTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTC 464 Query 37627 TTTCATCATTTGATAATTTTTTCCAAT--CATTAATATCTTTTGATAAATCAACTTCATC 37684 || || | ||| | ||| || || ||| ||||| || |||||||| || || Sbjct 463 GCTC-TCCTGGCTTAAGTGCATCCCATTGCA-CAATGTCTTTGGACAAATCAACCTCTTC 406 Query 37685 AACGGTCCAAAAACTTGCCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTAT 37744 ||| | ||| || || | || ||| || | ||| ||||| || ||| || Sbjct 405 AACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGAT 346 Query 37745 TGGAAATATTACAAA 37759 ||| ||||| || || Sbjct 345 TGGCAATATCACGAA 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589974201863920