Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq171037 125 6e-24 seq32333 125 6e-24 seq270304 123 2e-23 >seq171037 Length=1136 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || || ||||| || ||||||||||| | | || ||| |||| || | ||| Sbjct 764 ATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCGAGTTG 705 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| || | | |||||||| || ||||| ||||| || |||||||| || Sbjct 704 TTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTT 645 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||| | |||| |||||| | ||||||||||||||| | || || || || Sbjct 644 CGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAGAGTAATTGTCTTTCCAGT 585 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||||| |||||||| ||||| Sbjct 584 CAGTGTTTTGACAAATATTTGCAT 561 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 ||||||||||| || ||||| ||||||| | || | || || | ||| || || Sbjct 985 GTAGATTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCG 926 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 ||||| || || || || || || || ||||| |||||||||||||| ||||| ||| Sbjct 925 GCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTG 866 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 | |||| || |||||| | ||| ||||| | ||| | || ||||| || | |||| Sbjct 865 ATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTT 806 Query 101453 TTTACAAATATCTGCATG 101470 || ||||| ||||||||| Sbjct 805 TTAACAAAAATCTGCATG 788 >seq32333 Length=4216 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || || ||||| || ||||||||||| | | || ||| |||| || | ||| Sbjct 4012 ATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTGCCATCTTCGAGTTG 4071 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| || | | |||||||| || ||||| ||||| || |||||||| || Sbjct 4072 TTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGAATCTT 4131 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 ||||| | |||| |||||| | ||||||||||||||| | || || || || Sbjct 4132 CGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAGAGTAATTGTCTTTCCAGT 4191 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | ||||| |||||||| ||||| Sbjct 4192 CAGTGTTTTGACAAATATTTGCAT 4215 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101273 GTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCT 101332 ||||||||||| || ||||| ||||||| | || | || || | ||| || || Sbjct 3791 GTAGATTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCG 3850 Query 101333 GCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTT 101392 ||||| || || || || || || || ||||| |||||||||||||| ||||| ||| Sbjct 3851 GCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTG 3910 Query 101393 ACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTT 101452 | |||| || |||||| | ||| ||||| | ||| | || ||||| || | |||| Sbjct 3911 ATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTT 3970 Query 101453 TTTACAAATATCTGCATG 101470 || ||||| ||||||||| Sbjct 3971 TTAACAAAAATCTGCATG 3988 >seq270304 Length=645 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||||| |||||| |||||||| ||||||||||| || || | | || | | Sbjct 89 ACGAAGAACTAGATGAAGAGTAGATTCCTTTTGTATATTATAGTCAGAAAGTGTACGACC 148 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || || || || | | || ||||| | ||||| ||||| || Sbjct 149 ATCTTCAAGCTGCTTTCCAGCGAAAATAAGCCTTTGCTGATCTGAGGGAATACCTTCCTT 208 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||| || ||| || ||| |||| ||||| | | || ||| ||||| || || | Sbjct 209 ATCTTGTATCTTTGCCTTCACATTTTCGACAGTATTTGTCGGTTCAACTTCTAGGGTTAT 268 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| |||||||| ||||| ||||| || ||||| Sbjct 269 AGTTTTTCCGGTTAATGTTTTAACAAAAATTTGCAT 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394750310614086