Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq133394 170 1e-36
seq270304 143 2e-28
seq171037 143 2e-28
seq32333 143 2e-28
seq90801 122 6e-22
seq170309 104 2e-16
seq92447 104 2e-16
seq20909 89.7 3e-12
>seq133394
Length=1506
Score = 170 bits (188), Expect = 1e-36
Identities = 151/186 (81%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 474689 AAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747
|| |||||| ||||||| || | ||||||||| || | |||||| | ||||| |||||
Sbjct 1506 AAGATGAAAGAAACCGCTGAAAAC-TATCTTGGAGAAAAGGTAACTCAAGCAGTTATTAC 1448
Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807
||| ||||| |||||||||||| ||||||||||||||||||| || || |||| ||||||
Sbjct 1447 TGTACCAGCTTATTTTAATGATGCTCAACGTCAAGCAACTAAGGACGCTGGAAAAATTGC 1388
Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867
||| | | || ||| | ||||| |||||||||||||| || ||| | || |||||| |
Sbjct 1387 CGGTTTAGAAGTATTAAGAATTATCAATGAACCAACAGCTGCTGCATTAGCATATGGTTT 1328
Query 474868 TGATAA 474873
||||||
Sbjct 1327 TGATAA 1322
Score = 163 bits (180), Expect = 2e-34
Identities = 278/398 (70%), Gaps = 14/398 (4%)
Strand=Plus/Minus
Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849
|| ||||| ||||||| |||||| | ||||||||| |||||| | | |||
Sbjct 792 GTCAATCCAGATGAAGTTGTTGCCTTAGGAGCTGCTATCCAAGGTGGAGTGTTA------ 739
Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909
||| | | || |||| | ||||||| ||| ||||| ||||| || || ||||||
Sbjct 738 -AATAA-AGAAGTAACTGAT--ATATTGTTGTTG--GACGTTACTCCTCTATCTTTAGGT 685
Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969
||||||| ||||||| | | || | | ||||| | |||||| | || |||
Sbjct 684 ATTGAAACTCTTGGAGGAGTATTCACCAGGTTGATTGATCGTAATACTACCATTCCAACT 625
Query 475970 AAAAA-ATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028
||||| | | ||| | || || || | ||||||||| ||||||| || | |
Sbjct 624 AAAAAGAGCCAAATT-TTCTCTACAGCTGAGGATAATCAACATGCTGTAACTATTAGAGT 566
Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088
||| ||||||||||| | | | |||||||| |||||| |||||||||||
Sbjct 565 TTTTCAAGGTGAAAGAGACATGGCCGCTGATAATAAGTTACTTGGTCAATTTAATCTTGA 506
Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148
||||| || ||||| |||||| ||| ||||||||||| ||||||||||| |||||
Sbjct 505 TGGTATACCCCCTGCAAGTCGAGGAGGTCCACAAATTGAAGTAACTTTTGATATAGATGC 446
Query 476149 AAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTA 476186
|||||||| | || |||||||| ||||||||||
Sbjct 445 TAATGGTATAGTGAAAGTTACTGCCAAGGATAAATCTA 408
Score = 140 bits (154), Expect = 2e-27
Identities = 112/135 (83%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 290823 CAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGAC 290882
||| |||||||| ||||| ||| |||||||||||||| |||||||||||||| || | ||
Sbjct 1326 CAAAACCATATGCTAATGCAGCAGCTGTTGGTTCATTGATAATTCTTAATACTTCTAAAC 1385
Query 290883 CTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGA 290942
| ||||||||| | | || |||||| || ||||| ||||||||||||||||| || |
Sbjct 1386 CGGCAATTTTTCCAGCGTCCTTAGTTGCTTGACGTTGAGCATCATTAAAATAAGCTGGTA 1445
Query 290943 CTGTAATAACAGCTT 290957
| |||||||| ||||
Sbjct 1446 CAGTAATAACTGCTT 1460
>seq270304
Length=645
Score = 143 bits (158), Expect = 2e-28
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || || |||||||| ||| ||| || | |||||| |||| || ||
Sbjct 83 ACGAAGACGAAGAACTAGATGAAGAGTAGATTCCTTTTGTATATTATAGTCAGAAAGTGT 142
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||||||||| ||||||||||| |||||||| | ||| ||||| | ||||| ||
Sbjct 143 ACGACCATCTTCAAGCTGCTTTCCAGCGAAAATAAGCCTTTGCTGATCTGAGGGAATACC 202
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||| ||||| |||||| || ||| ||| | ||||| || || | ||| ||
Sbjct 203 TTCCTTATCTTGTATCTTTGCCTTCACATTTTCGACAGTATTTGTCGGTTCAACTTCTAG 262
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||| |||||||| ||||| | || ||||| ||||||||
Sbjct 263 GGTTATAGTTTTTCCGGTTAATGTTTTAACAAAAATTTG 301
>seq171037
Length=1136
Score = 143 bits (158), Expect = 2e-28
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || ||||||||||| || ||||| || ||| ||||| | ||| ||
Sbjct 782 ACGAAGACGAAGCACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGT 723
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
||| |||||| ||||| ||||||||||||||||| | |||||||||||| ||||| ||
Sbjct 722 CCTGCCATCTTCGAGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACC 663
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||||||||||||| || || || || || ||| | | ||||||
Sbjct 662 TTCCTTGTCTTGAATCTTCGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAG 603
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || || || || || || || |||||
Sbjct 602 AGTAATTGTCTTTCCAGTCAGTGTTTTGACAAATATTTG 564
Score = 87.8 bits (96), Expect = 1e-11
Identities = 135/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 480581 TTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAA 480640
|||||| || ||||||||| | || || | | ||||| ||||| ||||| |||||
Sbjct 980 TTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAA 921
Query 480641 AATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGC 480700
||| | ||||| || ||||| ||||||||||| || ||||| || || |||||
Sbjct 920 AATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTGATGTT 861
Query 480701 TTCAATAGTATCA-GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAA 480759
||| | || ||| || | | || ||| ||||| || || || || ||||| ||||
Sbjct 860 TTCCACTGTGTCACTTGATTCGACTTCCAA-AGTAATTGTCTTGCCCGTCAGAGTTTTAA 802
Query 480760 CGAAAATTTG 480769
| ||||| ||
Sbjct 801 CAAAAATCTG 792
>seq32333
Length=4216
Score = 143 bits (158), Expect = 2e-28
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||||||||| || ||||||||||| || ||||| || ||| ||||| | ||| ||
Sbjct 3994 ACGAAGACGAAGCACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGT 4053
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
||| |||||| ||||| ||||||||||||||||| | |||||||||||| ||||| ||
Sbjct 4054 CCTGCCATCTTCGAGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACC 4113
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||||||||||||| || || || || || ||| | | ||||||
Sbjct 4114 TTCCTTGTCTTGAATCTTCGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAG 4173
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||| || || || || || || || || || |||||
Sbjct 4174 AGTAATTGTCTTTCCAGTCAGTGTTTTGACAAATATTTG 4212
Score = 87.8 bits (96), Expect = 1e-11
Identities = 135/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Plus
Query 480581 TTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAA 480640
|||||| || ||||||||| | || || | | ||||| ||||| ||||| |||||
Sbjct 3796 TTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAA 3855
Query 480641 AATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGC 480700
||| | ||||| || ||||| ||||||||||| || ||||| || || |||||
Sbjct 3856 AATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTGATGTT 3915
Query 480701 TTCAATAGTATCA-GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAA 480759
||| | || ||| || | | || ||| ||||| || || || || ||||| ||||
Sbjct 3916 TTCCACTGTGTCACTTGATTCGACTTCCAA-AGTAATTGTCTTGCCCGTCAGAGTTTTAA 3974
Query 480760 CGAAAATTTG 480769
| ||||| ||
Sbjct 3975 CAAAAATCTG 3984
>seq90801
Length=2179
Score = 122 bits (134), Expect = 6e-22
Identities = 361/553 (65%), Gaps = 18/553 (3%)
Strand=Plus/Plus
Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392
|||| ||||| || || || || || ||||| ||||||| | |||| ||||| |
Sbjct 1181 TTGGGATTGACTTGGGCACCACCTATTCCTGTGTTGCTGTTTTCGAGCATGGAAAAGTTG 1240
Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452
|| |||| ||||||||||| || || ||||||| || | |||| |||| ||| |
Sbjct 1241 AAGTAATCGCCAATGACCAGGGCAACCGAACAACCCCTAGTTGTGTTGCTTTCACTAGTA 1300
Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512
||||| | | |||| || || || ||| | || ||||| ||||||| | ||| ||
Sbjct 1301 ATGAACGTTTAGTTGGCGAGGCAGCAAAAAACCAGGCTGCTACTAATCCAGCTAACACGG 1360
Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT- 474571
| || ||| | ||| | || ||||| ||| | || || | ||| || |||
Sbjct 1361 TCTTCGATTCCAAACGCTTCATTGGACGTCGCTGGGAGGAGCCTTGTGTTCAGGAGGATG 1420
Query 474572 --ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCA- 474628
| || ||| ||| || | | ||| ||| | ||| | || || |||
Sbjct 1421 CCAAGC-ACAT--GCCCTTCATGTTGACCAATAATAATGG----ACGGATTAAGGTGCAG 1473
Query 474629 -----ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683
||| | | | ||||| || |||| || ||| | || || || ||||| |
Sbjct 1474 GTTATATATAAGAA--CGAAACCCGACTGTTTTATCCCGAAGAGATATCCTCCATGGTGT 1531
Query 474684 TAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743
|| | ||||||||| | || || | ||| | ||| | || | || ||||| |
Sbjct 1532 TAACAAAAATGAAAGAGACGGCCGAAGCCTATTTAGGAGTAACTGTCTCGGAGGCAGTGA 1591
Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803
|||| || || || ||||| | |||| |||||||| || || || ||||| || | |
Sbjct 1592 TTACAGTGCCTGCTTATTTCAGTGATAGCCAACGTCAGGCGACCAAGGATGCCGGCATCA 1651
Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863
| || || ||||| ||| | || ||||| ||||| || || || ||||| | || ||||
Sbjct 1652 TCGCTGGACTTAACGTTCTGCGCATTATAAATGAGCCGACTGCCGCCGCCATCGCATATG 1711
Query 474864 GTCTTGATAAGAA 474876
|||| || || ||
Sbjct 1712 GTCTCGACAAAAA 1724
>seq170309
Length=1142
Score = 104 bits (114), Expect = 2e-16
Identities = 327/499 (66%), Gaps = 6/499 (1%)
Strand=Plus/Minus
Query 474381 ATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTT 474440
|||| || || || ||||| || ||||| || || ||| |||||||||| |||||
Sbjct 1002 ATGGCAAGGTGGAGATAATCGCGAATGATCAGGGCAATCGAACAACACCGAGTTATGTGG 943
Query 474441 CTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATC 474500
| || || || || |||| ||| ||||| || || || || |||| | || ||||
Sbjct 942 CGTTCACGGACACGGAACGTCTGATTGGCGACGCGGCCAAGAATCAGGTGGCCATGAATC 883
Query 474501 CTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTG 474560
| || || | || ||||| || | |||| || | | || || ||| | | |
Sbjct 882 CGACAAACACGGTGTTCGATGCGAAGCGCCTGATCGGCAGAAGGTTCGACGATCCAGCGG 823
Query 474561 TCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATA 474620
| | || ||| |||||||| || ||||||| | | | || | || |
Sbjct 822 TGCGTGGGGACATGAAGCATTGGCCGTTCGAGGTGATCCAGGAGGCCGGGAGGCCGAAAG 763
Query 474621 TA-GAAGCAA-TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAAT 474678
|| | | | | ||| || || || | || || || |||| | ||||| || ||
Sbjct 762 TACGCATCGAGTAC-CGT-GGCGAGAAGAAGGTGTTCTCGGCGGAGGAGATTTCGTCGAT 705
Query 474679 GGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATG 474737
||| | || ||||| | || ||| | ||| |||| |||| || | || ||||
Sbjct 704 GGTGCTGTTGAAGATGAAGGAGACGGCGGAGGCGTAT-TTGGGCAAGCAGGTGACGGATG 646
Query 474738 CAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGG 474797
| || || || || || || ||||| || || |||||||||||| || || |||||||
Sbjct 645 CCGTGATCACAGTGCCGGCCTATTTCAACGACAGTCAACGTCAAGCGACCAAGGATGCGG 586
Query 474798 GAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTG 474857
| || | || || ||||| | || || || ||||| || ||||||||||| |||
Sbjct 585 GCGCGATCTCGGGCCTGAATGTGCTGCGCATCATCAATGAGCCGACAGCAGCCGCGATTG 526
Query 474858 CTTATGGTCTTGATAAGAA 474876
| || |||||||| |||||
Sbjct 525 CCTACGGTCTTGACAAGAA 507
>seq92447
Length=2146
Score = 104 bits (114), Expect = 2e-16
Identities = 113/150 (75%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 356451 TTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAACATTTAATCCAGACAT 356510
|||||| | | ||||||| || ||||||||||| ||||| ||| ||||| | ||
Sbjct 166 TTTTCCCCTCAGAGGGAAAACTCCGTAATAATCTCTCCCGACGACACCCAATCCTGCCAC 225
Query 356511 AGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTACATTTATATCCTTCTTT 356570
||| || | |||||||||||| ||||| ||||| |||||||| ||| ||| | | |||
Sbjct 226 AGCCAAAGATTTAGCTGAATCACCTTCGGTAAGTATTAAAGTGCATCTATTTGAGTTTTT 285
Query 356571 TGTTCCAGCTTTATGAGCATTATATAATTT 356600
||| ||||| | || |||| | ||||||
Sbjct 286 TGTCCCAGCCTCATTGGCATCTTCTAATTT 315
>seq20909
Length=5117
Score = 89.7 bits (98), Expect = 3e-12
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Minus
Query 296083 TGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATT 296142
||||| || || | ||||| |||||||||||| || | |||||||| ||||||
Sbjct 1611 TGGATAGACTTTGAGAATGATTATAAAACAATGTATCCATCCTTTATGGAGTCTGTTTGG 1552
Query 296143 TGGTCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCT 296202
||| ||||| || || ||||| || | | | ||| | || |||||||||||
Sbjct 1551 TGGGTATTTAGGCAGCTCTATGATAAAGGACTAGTTTATCGTGGCATCAAAGTTATGCCA 1492
Query 296203 TATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAG 296262
||||| || | ||||| ||||| || || ||||||| || |||||| || |||||
Sbjct 1491 TATTCAACGGCTTGCACAACACCGTTGTCGAATTTTGAAGCCGGACAAAACTACAAAGAT 1432
Query 296263 ATTATTGATCCATCTGTTACTTGTTGTTTTGAAATTATT 296301
| | ||||| || || || || |||| | || |||
Sbjct 1431 ACTCAGGATCCTTCAAGTA-TTATTATTTTAAGATAATT 1394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3254607354616904
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