Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq133394 170 1e-36 seq270304 143 2e-28 seq171037 143 2e-28 seq32333 143 2e-28 seq90801 122 6e-22 seq170309 104 2e-16 seq92447 104 2e-16 seq20909 89.7 3e-12 >seq133394 Length=1506 Score = 170 bits (188), Expect = 1e-36 Identities = 151/186 (81%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 474689 AAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTAC 474747 || |||||| ||||||| || | ||||||||| || | |||||| | ||||| ||||| Sbjct 1506 AAGATGAAAGAAACCGCTGAAAAC-TATCTTGGAGAAAAGGTAACTCAAGCAGTTATTAC 1448 Query 474748 TGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGC 474807 ||| ||||| |||||||||||| ||||||||||||||||||| || || |||| |||||| Sbjct 1447 TGTACCAGCTTATTTTAATGATGCTCAACGTCAAGCAACTAAGGACGCTGGAAAAATTGC 1388 Query 474808 AGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCT 474867 ||| | | || ||| | ||||| |||||||||||||| || ||| | || |||||| | Sbjct 1387 CGGTTTAGAAGTATTAAGAATTATCAATGAACCAACAGCTGCTGCATTAGCATATGGTTT 1328 Query 474868 TGATAA 474873 |||||| Sbjct 1327 TGATAA 1322 Score = 163 bits (180), Expect = 2e-34 Identities = 278/398 (70%), Gaps = 14/398 (4%) Strand=Plus/Minus Query 475790 GTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT 475849 || ||||| ||||||| |||||| | ||||||||| |||||| | | ||| Sbjct 792 GTCAATCCAGATGAAGTTGTTGCCTTAGGAGCTGCTATCCAAGGTGGAGTGTTA------ 739 Query 475850 CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGT 475909 ||| | | || |||| | ||||||| ||| ||||| ||||| || || |||||| Sbjct 738 -AATAA-AGAAGTAACTGAT--ATATTGTTGTTG--GACGTTACTCCTCTATCTTTAGGT 685 Query 475910 CTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGC 475969 ||||||| ||||||| | | || | | ||||| | |||||| | || ||| Sbjct 684 ATTGAAACTCTTGGAGGAGTATTCACCAGGTTGATTGATCGTAATACTACCATTCCAACT 625 Query 475970 AAAAA-ATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAAT 476028 ||||| | | ||| | || || || | ||||||||| ||||||| || | | Sbjct 624 AAAAAGAGCCAAATT-TTCTCTACAGCTGAGGATAATCAACATGCTGTAACTATTAGAGT 566 Query 476029 CTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA 476088 ||| ||||||||||| | | | |||||||| |||||| ||||||||||| Sbjct 565 TTTTCAAGGTGAAAGAGACATGGCCGCTGATAATAAGTTACTTGGTCAATTTAATCTTGA 506 Query 476089 AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGC 476148 ||||| || ||||| |||||| ||| ||||||||||| ||||||||||| ||||| Sbjct 505 TGGTATACCCCCTGCAAGTCGAGGAGGTCCACAAATTGAAGTAACTTTTGATATAGATGC 446 Query 476149 AAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTA 476186 |||||||| | || |||||||| |||||||||| Sbjct 445 TAATGGTATAGTGAAAGTTACTGCCAAGGATAAATCTA 408 Score = 140 bits (154), Expect = 2e-27 Identities = 112/135 (83%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 290823 CAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGAC 290882 ||| |||||||| ||||| ||| |||||||||||||| |||||||||||||| || | || Sbjct 1326 CAAAACCATATGCTAATGCAGCAGCTGTTGGTTCATTGATAATTCTTAATACTTCTAAAC 1385 Query 290883 CTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGA 290942 | ||||||||| | | || |||||| || ||||| ||||||||||||||||| || | Sbjct 1386 CGGCAATTTTTCCAGCGTCCTTAGTTGCTTGACGTTGAGCATCATTAAAATAAGCTGGTA 1445 Query 290943 CTGTAATAACAGCTT 290957 | |||||||| |||| Sbjct 1446 CAGTAATAACTGCTT 1460 >seq270304 Length=645 Score = 143 bits (158), Expect = 2e-28 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || |||||||| ||| ||| || | |||||| |||| || || Sbjct 83 ACGAAGACGAAGAACTAGATGAAGAGTAGATTCCTTTTGTATATTATAGTCAGAAAGTGT 142 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| ||||||||||| |||||||| | ||| ||||| | ||||| || Sbjct 143 ACGACCATCTTCAAGCTGCTTTCCAGCGAAAATAAGCCTTTGCTGATCTGAGGGAATACC 202 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||| ||||| |||||| || ||| ||| | ||||| || || | ||| || Sbjct 203 TTCCTTATCTTGTATCTTTGCCTTCACATTTTCGACAGTATTTGTCGGTTCAACTTCTAG 262 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| |||||||| ||||| | || ||||| |||||||| Sbjct 263 GGTTATAGTTTTTCCGGTTAATGTTTTAACAAAAATTTG 301 >seq171037 Length=1136 Score = 143 bits (158), Expect = 2e-28 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| || ||||| || ||| ||||| | ||| || Sbjct 782 ACGAAGACGAAGCACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGT 723 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| ||||| ||||||||||||||||| | |||||||||||| ||||| || Sbjct 722 CCTGCCATCTTCGAGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACC 663 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||||||| || || || || || ||| | | |||||| Sbjct 662 TTCCTTGTCTTGAATCTTCGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAG 603 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || || || || ||||| Sbjct 602 AGTAATTGTCTTTCCAGTCAGTGTTTTGACAAATATTTG 564 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 480581 TTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAA 480640 |||||| || ||||||||| | || || | | ||||| ||||| ||||| ||||| Sbjct 980 TTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAA 921 Query 480641 AATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGC 480700 ||| | ||||| || ||||| ||||||||||| || ||||| || || ||||| Sbjct 920 AATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTGATGTT 861 Query 480701 TTCAATAGTATCA-GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAA 480759 ||| | || ||| || | | || ||| ||||| || || || || ||||| |||| Sbjct 860 TTCCACTGTGTCACTTGATTCGACTTCCAA-AGTAATTGTCTTGCCCGTCAGAGTTTTAA 802 Query 480760 CGAAAATTTG 480769 | ||||| || Sbjct 801 CAAAAATCTG 792 >seq32333 Length=4216 Score = 143 bits (158), Expect = 2e-28 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| || ||||| || ||| ||||| | ||| || Sbjct 3994 ACGAAGACGAAGCACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGT 4053 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 ||| |||||| ||||| ||||||||||||||||| | |||||||||||| ||||| || Sbjct 4054 CCTGCCATCTTCGAGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACC 4113 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||||||| || || || || || ||| | | |||||| Sbjct 4114 TTCCTTGTCTTGAATCTTCGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAG 4173 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || || || || ||||| Sbjct 4174 AGTAATTGTCTTTCCAGTCAGTGTTTTGACAAATATTTG 4212 Score = 87.8 bits (96), Expect = 1e-11 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 480581 TTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAA 480640 |||||| || ||||||||| | || || | | ||||| ||||| ||||| ||||| Sbjct 3796 TTCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAA 3855 Query 480641 AATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGC 480700 ||| | ||||| || ||||| ||||||||||| || ||||| || || ||||| Sbjct 3856 AATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGATTTTAGCTTTGATGTT 3915 Query 480701 TTCAATAGTATCA-GTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAA 480759 ||| | || ||| || | | || ||| ||||| || || || || ||||| |||| Sbjct 3916 TTCCACTGTGTCACTTGATTCGACTTCCAA-AGTAATTGTCTTGCCCGTCAGAGTTTTAA 3974 Query 480760 CGAAAATTTG 480769 | ||||| || Sbjct 3975 CAAAAATCTG 3984 >seq90801 Length=2179 Score = 122 bits (134), Expect = 6e-22 Identities = 361/553 (65%), Gaps = 18/553 (3%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| ||||| || || || || || ||||| ||||||| | |||| ||||| | Sbjct 1181 TTGGGATTGACTTGGGCACCACCTATTCCTGTGTTGCTGTTTTCGAGCATGGAAAAGTTG 1240 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 || |||| ||||||||||| || || ||||||| || | |||| |||| ||| | Sbjct 1241 AAGTAATCGCCAATGACCAGGGCAACCGAACAACCCCTAGTTGTGTTGCTTTCACTAGTA 1300 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 ||||| | | |||| || || || ||| | || ||||| ||||||| | ||| || Sbjct 1301 ATGAACGTTTAGTTGGCGAGGCAGCAAAAAACCAGGCTGCTACTAATCCAGCTAACACGG 1360 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT- 474571 | || ||| | ||| | || ||||| ||| | || || | ||| || ||| Sbjct 1361 TCTTCGATTCCAAACGCTTCATTGGACGTCGCTGGGAGGAGCCTTGTGTTCAGGAGGATG 1420 Query 474572 --ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCA- 474628 | || ||| ||| || | | ||| ||| | ||| | || || ||| Sbjct 1421 CCAAGC-ACAT--GCCCTTCATGTTGACCAATAATAATGG----ACGGATTAAGGTGCAG 1473 Query 474629 -----ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683 ||| | | | ||||| || |||| || ||| | || || || ||||| | Sbjct 1474 GTTATATATAAGAA--CGAAACCCGACTGTTTTATCCCGAAGAGATATCCTCCATGGTGT 1531 Query 474684 TAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 || | ||||||||| | || || | ||| | ||| | || | || ||||| | Sbjct 1532 TAACAAAAATGAAAGAGACGGCCGAAGCCTATTTAGGAGTAACTGTCTCGGAGGCAGTGA 1591 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 |||| || || || ||||| | |||| |||||||| || || || ||||| || | | Sbjct 1592 TTACAGTGCCTGCTTATTTCAGTGATAGCCAACGTCAGGCGACCAAGGATGCCGGCATCA 1651 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 | || || ||||| ||| | || ||||| ||||| || || || ||||| | || |||| Sbjct 1652 TCGCTGGACTTAACGTTCTGCGCATTATAAATGAGCCGACTGCCGCCGCCATCGCATATG 1711 Query 474864 GTCTTGATAAGAA 474876 |||| || || || Sbjct 1712 GTCTCGACAAAAA 1724 >seq170309 Length=1142 Score = 104 bits (114), Expect = 2e-16 Identities = 327/499 (66%), Gaps = 6/499 (1%) Strand=Plus/Minus Query 474381 ATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTT 474440 |||| || || || ||||| || ||||| || || ||| |||||||||| ||||| Sbjct 1002 ATGGCAAGGTGGAGATAATCGCGAATGATCAGGGCAATCGAACAACACCGAGTTATGTGG 943 Query 474441 CTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATC 474500 | || || || || |||| ||| ||||| || || || || |||| | || |||| Sbjct 942 CGTTCACGGACACGGAACGTCTGATTGGCGACGCGGCCAAGAATCAGGTGGCCATGAATC 883 Query 474501 CTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTG 474560 | || || | || ||||| || | |||| || | | || || ||| | | | Sbjct 882 CGACAAACACGGTGTTCGATGCGAAGCGCCTGATCGGCAGAAGGTTCGACGATCCAGCGG 823 Query 474561 TCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATA 474620 | | || ||| |||||||| || ||||||| | | | || | || | Sbjct 822 TGCGTGGGGACATGAAGCATTGGCCGTTCGAGGTGATCCAGGAGGCCGGGAGGCCGAAAG 763 Query 474621 TA-GAAGCAA-TACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAAT 474678 || | | | | ||| || || || | || || || |||| | ||||| || || Sbjct 762 TACGCATCGAGTAC-CGT-GGCGAGAAGAAGGTGTTCTCGGCGGAGGAGATTTCGTCGAT 705 Query 474679 GGTTTTAGCCAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAG-TAACTGATG 474737 ||| | || ||||| | || ||| | ||| |||| |||| || | || |||| Sbjct 704 GGTGCTGTTGAAGATGAAGGAGACGGCGGAGGCGTAT-TTGGGCAAGCAGGTGACGGATG 646 Query 474738 CAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGG 474797 | || || || || || || ||||| || || |||||||||||| || || ||||||| Sbjct 645 CCGTGATCACAGTGCCGGCCTATTTCAACGACAGTCAACGTCAAGCGACCAAGGATGCGG 586 Query 474798 GAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTG 474857 | || | || || ||||| | || || || ||||| || ||||||||||| ||| Sbjct 585 GCGCGATCTCGGGCCTGAATGTGCTGCGCATCATCAATGAGCCGACAGCAGCCGCGATTG 526 Query 474858 CTTATGGTCTTGATAAGAA 474876 | || |||||||| ||||| Sbjct 525 CCTACGGTCTTGACAAGAA 507 >seq92447 Length=2146 Score = 104 bits (114), Expect = 2e-16 Identities = 113/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 356451 TTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAACATTTAATCCAGACAT 356510 |||||| | | ||||||| || ||||||||||| ||||| ||| ||||| | || Sbjct 166 TTTTCCCCTCAGAGGGAAAACTCCGTAATAATCTCTCCCGACGACACCCAATCCTGCCAC 225 Query 356511 AGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTACATTTATATCCTTCTTT 356570 ||| || | |||||||||||| ||||| ||||| |||||||| ||| ||| | | ||| Sbjct 226 AGCCAAAGATTTAGCTGAATCACCTTCGGTAAGTATTAAAGTGCATCTATTTGAGTTTTT 285 Query 356571 TGTTCCAGCTTTATGAGCATTATATAATTT 356600 ||| ||||| | || |||| | |||||| Sbjct 286 TGTCCCAGCCTCATTGGCATCTTCTAATTT 315 >seq20909 Length=5117 Score = 89.7 bits (98), Expect = 3e-12 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 296083 TGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAATCTGTTATT 296142 ||||| || || | ||||| |||||||||||| || | |||||||| |||||| Sbjct 1611 TGGATAGACTTTGAGAATGATTATAAAACAATGTATCCATCCTTTATGGAGTCTGTTTGG 1552 Query 296143 TGGTCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAAGTTATGCCT 296202 ||| ||||| || || ||||| || | | | ||| | || ||||||||||| Sbjct 1551 TGGGTATTTAGGCAGCTCTATGATAAAGGACTAGTTTATCGTGGCATCAAAGTTATGCCA 1492 Query 296203 TATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAATTATAAAGAG 296262 ||||| || | ||||| ||||| || || ||||||| || |||||| || ||||| Sbjct 1491 TATTCAACGGCTTGCACAACACCGTTGTCGAATTTTGAAGCCGGACAAAACTACAAAGAT 1432 Query 296263 ATTATTGATCCATCTGTTACTTGTTGTTTTGAAATTATT 296301 | | ||||| || || || || |||| | || ||| Sbjct 1431 ACTCAGGATCCTTCAAGTA-TTATTATTTTAAGATAATT 1394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3254607354616904