Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq93010 118 1e-21
>seq93010
Length=2134
Score = 118 bits (130), Expect = 1e-21
Identities = 417/645 (65%), Gaps = 11/645 (2%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| | ||| | ||| | ||| |||| || || ||| || ||||| || | |||
Sbjct 220 CCTCAGCATATGCTGATGAGAGTCTCAATTGGTATTCACTTTGATGACATAGAGGCAGTC 279
Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330
| || || ||| || ||||||| | || ||| | |||||| | || || |||||
Sbjct 280 TGTGAAACCTACAACTTGATGTCCTTGAAGTG-GTTTACTCACGCTTCCCCCACTCTCTT 338
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| ||||||||||||| || ||||||||||| || || ||| || | | ||||| ||
Sbjct 339 TAATTCTGGTACACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCACAATGAAGGATGA 398
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| || | || || |||| || || | | ||||| | || || || | |||||
Sbjct 399 CAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTTCTAAAAGTGCTGG 458
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||||||| | | | ||| | | | || | | |||| || || ||
Sbjct 459 GGGTATTGGTGTAAATGTTCATTGCATACGCGGCACTGGTACCTATATTGCTGGTACGAA 518
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|||| | || |||| || | |||||| | || || |||||| || || ||||| ||
Sbjct 519 TGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATACTGCTCGCTACGT 578
Query 75571 AAATCAAGCGGGGCGTCGCA--AGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCA 75624
|||| ||| || || ||| ||| || | || |||| | || ||||||||
Sbjct 579 CGATCA---GGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCGAGCCATGGCA 635
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
| | || || | ||| | || ||||| ||| |||| ||||||| |||
Sbjct 636 TACGGACATTCTCTCCTTCGTAGAATTACGCAAGAACACTGGTGCAGAAGAGGTTCGTGC 695
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
||| ||||| |||| |||| ||||| || || || || ||| || |||||||
Sbjct 696 TAGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTGTTTATGCGCCGTGTTGAGGCTAA 755
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
||| | ||| |||| | ||| || | || || || || || | ||||||
Sbjct 756 TGGCGACTGGAGTCTTATGGATCCGCACGAATGTCCTGGCCTTTCTGATTTGTGGGGTGA 815
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC 75849
| ||||| | || ||| || ||||||| |||||| | |||
Sbjct 816 TCAATTTGATTCACTTTACGAAAGGTATGAAAGGGAGGGCAAAGC 860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594210182146240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |