Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq93010 118 1e-21 >seq93010 Length=2134 Score = 118 bits (130), Expect = 1e-21 Identities = 417/645 (65%), Gaps = 11/645 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||| | ||| | ||| |||| || || ||| || ||||| || | ||| Sbjct 220 CCTCAGCATATGCTGATGAGAGTCTCAATTGGTATTCACTTTGATGACATAGAGGCAGTC 279 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || ||| || ||||||| | || ||| | |||||| | || || ||||| Sbjct 280 TGTGAAACCTACAACTTGATGTCCTTGAAGTG-GTTTACTCACGCTTCCCCCACTCTCTT 338 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||||||||||| || ||||||||||| || || ||| || | | ||||| || Sbjct 339 TAATTCTGGTACACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCACAATGAAGGATGA 398 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | || || |||| || || | | ||||| | || || || | ||||| Sbjct 399 CAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTTCTAAAAGTGCTGG 458 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||||||| | | | ||| | | | || | | |||| || || || Sbjct 459 GGGTATTGGTGTAAATGTTCATTGCATACGCGGCACTGGTACCTATATTGCTGGTACGAA 518 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 |||| | || |||| || | |||||| | || || |||||| || || ||||| || Sbjct 519 TGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATACTGCTCGCTACGT 578 Query 75571 AAATCAAGCGGGGCGTCGCA--AGG---GGT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 |||| ||| || || ||| ||| || | || |||| | || |||||||| Sbjct 579 CGATCA---GGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCGAGCCATGGCA 635 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 | | || || | ||| | || ||||| ||| |||| ||||||| ||| Sbjct 636 TACGGACATTCTCTCCTTCGTAGAATTACGCAAGAACACTGGTGCAGAAGAGGTTCGTGC 695 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 ||| ||||| |||| |||| ||||| || || || || ||| || ||||||| Sbjct 696 TAGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTGTTTATGCGCCGTGTTGAGGCTAA 755 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| |||| | ||| || | || || || || || | |||||| Sbjct 756 TGGCGACTGGAGTCTTATGGATCCGCACGAATGTCCTGGCCTTTCTGATTTGTGGGGTGA 815 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC 75849 | ||||| | || ||| || ||||||| |||||| | ||| Sbjct 816 TCAATTTGATTCACTTTACGAAAGGTATGAAAGGGAGGGCAAAGC 860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594210182146240