Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq93010 123 7e-23 seq56037 104 7e-17 seq150668 86.0 2e-11 >seq93010 Length=2134 Score = 123 bits (136), Expect = 7e-23 Identities = 382/578 (66%), Gaps = 21/578 (4%) Strand=Plus/Minus Query 155936 CCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGATTCTTCCGTA 155994 ||||| ||||| ||||| ||||| || ||| || | || ||| ||||| |||| Sbjct 720 CCAAAGGGCATAAAAAAGATCCCTAGCACGAACCTCTTCTGCACCAGTG-TTCTTGCGTA 662 Query 155995 GCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCAT 156054 |||| ||| ||| || | ||| |||||| ||||| || ||||| |||| Sbjct 661 ATTCTACGAAGGAGAGAATGTCCGTATGCCATGGCTCGAGATAGATGGCAAAGGCACCAG 602 Query 156055 TCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAG 156111 |||| || ||||||||||| || || |||||||| || || || |||| || ||| | Sbjct 601 GCCTCCTGTTACCACCCTGATCGACGTAGCGAGCAGTATTGTTAAAAACACGTAACATTG 542 Query 156112 GAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACAT 156171 | | || |||||||| ||||| || || ||||| | ||||| ||| | Sbjct 541 GCACAAGTCCATTGGAGTAACCATTCGTACCAGCAATATAGGTACCAGTGCCGCGTATGC 482 Query 156172 TATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAG 156231 ||||| || || |||||||| || | | ||||||||| | || |||| | | | Sbjct 481 AATGAACATTTACACCAATACCCCCAGCACTTTTAGAAATAAGGGCACATTGCCGGAGTG 422 Query 156232 TATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA--CGAACTTAA 156289 ||| |||| || ||||| ||||| | ||||| | ||| | || | || | Sbjct 421 TATCATAAATGCCCTCAATGCTGTCATCCTTCATTGTGACAAGAAAACAGCTGGAC--AT 364 Query 156290 TTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATT 156349 || || | |||||| |||| || || || || || | || ||| |||| |||| Sbjct 363 CTGGGGCCTTGGTGTACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGTAAACCACTTCAA 304 Query 156350 AGACATATAATCGTATGTCTC-CTTAAT-CTTCTCAAG--ATTAGACCCGTGAATACAGA 156405 ||||| | | ||| || || | | | | ||| | | || | | |||||||| | Sbjct 303 GGACATCAAGTTGTAGGTTTCACAGACTGCCTCT-ATGTCATCAAA---GTGAATACCAA 248 Query 156406 TAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA--TCACTCCATCAATTCGCAG 156463 | ||||| |||||| ||||||||||||||| || || | | | ||| ||| || Sbjct 247 TTGAGACTCTCATCAGCATATGCTGAGGACGTTCATGAACTTTATT--ATCGATTTTAAG 190 Query 156464 AAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAAT 156501 ||| |||| | | |||| || ||||| || || |||| Sbjct 189 AAGATATGAGTGCTCCAATGTCTTAAAGCCAAAGTAAT 152 >seq56037 Length=3109 Score = 104 bits (114), Expect = 7e-17 Identities = 226/336 (67%), Gaps = 2/336 (1%) Strand=Plus/Minus Query 302545 ACGGTCATATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAAT 302603 || ||| |||||| || ||||| || || ||||| |||||| |||||||||||||| Sbjct 1001 ACAGTCCCATCATATTTAACCATAACTGACT-CCATAGCCTTGATCAAACGACGCTGAAT 943 Query 302604 ATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGC 302663 || || || | ||||| ||||||||||||||||| || | ||||| |||||||| Sbjct 942 GTAGCCCGTCTCTGCAGTTTTGACAGCTGTATCAATTAGGCCTTCTCGACCTCCCATAGC 883 Query 302664 ATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACG 302723 |||||| || | ||| || || || | | | | || ||||||| || || || Sbjct 882 ATGGAAAAAAAACTCAGTAGGAGTGAGGCCAGCCAGATAAGAATTCTCAACAAAGCCGCG 823 Query 302724 CGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTA 302783 | || || || || || | |||| || || | || | | | |||| | Sbjct 822 AGATTCCGGACCATAATCATCCTGGATAAAATGGGGTAAAGTTCGATGACGAAAGCCAAA 763 Query 302784 TGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || || | || || |||||||| || ||||| | ||| | || | || |||||||| Sbjct 762 GGGAATTCTTTTGCCTTCAACGTTTTGTTGTCCGACGCAAGCGATAACTTGAGAAATATT 703 Query 302844 TAAATCACTGCCCTTGGAGCCAGCATTTACCATAAT 302879 | | | || |||||||||||| ||||| || Sbjct 702 AATACGAGACCCTTTGGAGCCAGCAACCACCATTAT 667 >seq150668 Length=1318 Score = 86.0 bits (94), Expect = 2e-11 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 133232 GCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAAT-TTAGGAACACGGTTTATGGG 133290 || ||||| ||||| |||||||| || ||| | |||||| ||| | ||||||| Sbjct 418 GCATTTTTCGCTGCTAGTGATGGGATAGTTTTGGAAAATCTTATCGAG-CGGTTTAGCCA 476 Query 133291 AGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATAT 133350 ||||||||| | | |||| || |||||||| |||| || || || || ||||| Sbjct 477 AGAAGTTCAGATCCCAGAAGTTCGCTGTTTTTATGGCATACAAATCGCTATTGAGAATAT 536 Query 133351 CCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGAT 133396 |||||| | || ||| ||| |||||||||||||||| |||| Sbjct 537 ACATTCTGAAATGTACTCTCTTCTTATTGATACTTACATCAGAGAT 582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1465851073142126