Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq268294 143 3e-28
seq110960 104 3e-16
seq75644 104 3e-16
>seq268294
Length=651
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || ||| || |||||| ||||||||||||||||| || | | ||
Sbjct 37 GCTTGGCCAGCTCCCCAGGCAAGAGCAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGA 96
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||| ||||| ||| ||| || ||||||| |||| |
Sbjct 97 TGGTGGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCTTCCCCTGCGATGCGCTCGAAGA 156
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||| ||||| |||||||||| ||| | |||| |||||||| |||||||
Sbjct 157 CATCGTTAACAAAGGAGTTCATGATGCTCATGGCCTTGGAAGAGATGCCGGTATCGGGGT 216
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||||||||| |||||
Sbjct 217 GCACCTGCTTGAGCACTTTGTA 238
>seq110960
Length=1818
Score = 104 bits (114), Expect = 3e-16
Identities = 111/144 (77%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|||||||||||||| || | ||| ||||| |||| | ||| ||||| ||||| ||||||
Sbjct 923 CCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTC 864
Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
|| |||||||| || | |||| |||||||| || || |||| || |||| || |||||
Sbjct 863 TTAAGCCAAAATATAGACGCA-AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAA 805
Query 869299 GCCGATGAGCCGCTCGGCAAAGGT 869322
| | | ||||||||||| ||
Sbjct 804 GGCTGCAATACGCTCGGCAAACGT 781
>seq75644
Length=2520
Score = 104 bits (114), Expect = 3e-16
Identities = 111/144 (77%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|||||||||||||| || | ||| ||||| |||| | ||| ||||| ||||| ||||||
Sbjct 896 CCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTC 955
Query 869240 TTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
|| |||||||| || | |||| |||||||| || || |||| || |||| || |||||
Sbjct 956 TTAAGCCAAAATATAGACGCA-AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAA 1014
Query 869299 GCCGATGAGCCGCTCGGCAAAGGT 869322
| | | ||||||||||| ||
Sbjct 1015 GGCTGCAATACGCTCGGCAAACGT 1038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6081174098428166
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |