Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 104 2e-17
seq32333 96.9 3e-15
>seq171037
Length=1136
Score = 104 bits (114), Expect = 2e-17
Identities = 152/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 110255 ATTTATAAGAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACC 110314
|||| ||| || |||||||||||||||||||||||| | || || || || |||||
Sbjct 543 ATTTTAAAGCAATCTAAAATGCAAATATTTGTCAAAACACTGACTGGAAAGACAATTACT 602
Query 110315 GTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAA 110374
| ||| ||| | || || | | | ||||| ||||||| ||||| |||
Sbjct 603 CTTGAAGTGGAATCAAGTGACACAATAGAGAACGTAAAGTCGAAGATTCAAGACAAGGAA 662
Query 110375 GGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGA 110434
|| | || ||||||||||| ||||||| ||| || ||||| || || |||| |||
Sbjct 663 GGTATTCCACCTGATCAACAAAGGCTTATTTTTGCTGGAAAACAACTCGAAGATGGCAGG 722
Query 110435 ACAATGGCGGATTACAACATTCAAAAAGAATCTAC 110469
|| | | |||||||| ||||| ||||| || ||
Sbjct 723 ACCCTATCAGATTACAATATTCAGAAAGAGTCAAC 757
>seq32333
Length=4216
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
||||||||||||||||||||| | || || || || ||||| | ||| ||| |
Sbjct 4216 AATGCAAATATTTGTCAAAACACTGACTGGAAAGACAATTACTCTTGAAGTGGAATCAAG 4157
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || | | | ||||| ||||||| ||||| ||||| | || |||||
Sbjct 4156 TGACACAATAGAGAACGTAAAGTCGAAGATTCAAGACAAGGAAGGTATTCCACCTGATCA 4097
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|||||| ||||||| ||| || ||||| || || |||| ||| || | | ||||||||
Sbjct 4096 ACAAAGGCTTATTTTTGCTGGAAAACAACTCGAAGATGGCAGGACCCTATCAGATTACAA 4037
Query 110452 CATTCAAAAAGAATCTAC 110469
||||| ||||| || ||
Sbjct 4036 TATTCAGAAAGAGTCAAC 4019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 411249641248214
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |