Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq268294 192 9e-43
seq110960 100 4e-15
seq75644 100 4e-15
>seq268294
Length=651
Score = 192 bits (212), Expect = 9e-43
Identities = 187/241 (78%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485473 ACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATGA 1485532
|||||||||| |||||||| ||||| || ||||||||| ||||||| || || ||| ||
Sbjct 1 ACTTGGTGACAGCCTTGGTGCCCTCGGACACGGCGTGCTTGGCCAGCTCCCCAGGCAAGA 60
Query 1485533 TCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCG 1485592
|||||| ||||||||||||||||| |||| | ||| ||| ||||||||| | | |
Sbjct 61 GCAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGTGAG 120
Query 1485593 CCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGA 1485652
|||||||| ||| || ||||||| |||| | ||||| ||||| ||||||||||
Sbjct 121 CCAGGCGGGAGGCTTCCCCTGCGATGCGCTCGAAGACATCGTTAACAAAGGAGTTCATGA 180
Query 1485653 TCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAA 1485712
| ||| | ||| |||||||| ||||||||||||||||||||||| ||||| |
Sbjct 181 TGCTCATGGCCTTGGAAGAGATGCCGGTATCGGGGTGCACCTGCTTGAGCACTTTGTACA 240
Query 1485713 C 1485713
|
Sbjct 241 C 241
>seq110960
Length=1818
Score = 100 bits (110), Expect = 4e-15
Identities = 110/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|||||||||||||| || | ||| ||||| ||| | ||| ||||| ||||| ||||||
Sbjct 923 CCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTC 864
Query 794401 TTGAGCCAAAAGATGG-CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
|| |||||||| || | | || |||||||| || || |||| || |||| || |||||
Sbjct 863 TTAAGCCAAAATATAGACGCA-AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAA 805
Query 794460 GCCGACGAGCCGCTCGGCAAAAGT 794483
| | | | ||||||||||| ||
Sbjct 804 GGCTGCAATACGCTCGGCAAACGT 781
>seq75644
Length=2520
Score = 100 bits (110), Expect = 4e-15
Identities = 110/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|||||||||||||| || | ||| ||||| ||| | ||| ||||| ||||| ||||||
Sbjct 896 CCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCATCAGGCCACGCTTC 955
Query 794401 TTGAGCCAAAAGAT-GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
|| |||||||| || | | || |||||||| || || |||| || |||| || |||||
Sbjct 956 TTAAGCCAAAATATAGACGCA-AAACTGCCGGAAAAGAAGACTCCTTCGATTGCAGCAAA 1014
Query 794460 GCCGACGAGCCGCTCGGCAAAAGT 794483
| | | | ||||||||||| ||
Sbjct 1015 GGCTGCAATACGCTCGGCAAACGT 1038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7882589701648722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |