Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq171037 84.2 2e-11 seq32333 84.2 2e-11 >seq171037 Length=1136 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || |||||||| ||||| |||||| || || |||| ||| || || || || | Sbjct 985 GTAGATTCTTTCTGAATATTATAATCGG--ATAATGTACGACTGTCTTCTAGTTGTTTTC 928 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| | || |||||||| || || || ||||| || || ||| ||| ||| Sbjct 927 CGGCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGAT-TTTAGCT 869 Query 133582 T-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | || | || || ||||| | | || || || | || | || ||||| |||||| Sbjct 868 TTGATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGA 809 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| || |||||||||||| Sbjct 808 GTTTTAACAAAAATCTGCATG 788 >seq32333 Length=4216 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || |||||||| ||||| |||||| || || |||| ||| || || || || | Sbjct 3791 GTAGATTCTTTCTGAATATTATAATCGG--ATAATGTACGACTGTCTTCTAGTTGTTTTC 3848 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| | || |||||||| || || || ||||| || || ||| ||| ||| Sbjct 3849 CGGCAAAAATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGAT-TTTAGCT 3907 Query 133582 T-GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | || | || || ||||| | | || || || | || | || ||||| |||||| Sbjct 3908 TTGATGTTTTCCACTGTGTCACTTGATTCGACTTCCAAAGTAATTGTCTTGCCCGTCAGA 3967 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| || |||||||||||| Sbjct 3968 GTTTTAACAAAAATCTGCATG 3988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481508882821520