Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq93010 125 2e-23
>seq93010
Length=2134
Score = 125 bits (138), Expect = 2e-23
Identities = 319/485 (66%), Gaps = 3/485 (1%)
Strand=Plus/Plus
Query 110523 TGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAA 110582
|| |||||| | ||| || ||||| ||||| || ||||||||| | || ||
Sbjct 373 TGTTTTCTTGTCACAATGAAGGATGACAGCATTGAGGGCATTTATGATACACTCCGGCAA 432
Query 110583 ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCA 110642
||| ||||||||||||| |||| || |||||| | | |||||| || |||
Sbjct 433 TGTGCCCTTATTTCTAAAAGTGCTGGGGGTATTGGTGTAAATGTTCATTGCATACGCGGC 492
Query 110643 AAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGA 110702
| || | |||| || |||| ||| || | ||||||||| ||||||||| |
Sbjct 493 ACTGGTACCTATATTGCTGGTACGAATGGTTACTCCAATGGACTTGTGCCAATGTTACGT 552
Query 110703 GTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTT 110759
|| || ||| | ||||| || || |||| |||||||| ||| ||| | |||
Sbjct 553 GTTTTTAACAATACTGCTCGCTACGTCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTT 612
Query 110760 GCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAAT 110819
|| ||||||||||| || |||||| | || || | ||| ||||| | || || ||
Sbjct 613 GCCATCTATCTCGAGCCATGGCATACGGACATTCTCTCCTTCGTAGAATTACGCAAGAAC 672
Query 110820 CAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTA 110879
|| ||||| | || | ||| | |||||||| | ||||| | ||| |
Sbjct 673 ACTGGTGCAGAAGAGGTTCGTGCTAGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTG 732
Query 110880 TTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCT 110939
|| ||| |||||| | | |||||| ||| ||||||| ||| || | ||||
Sbjct 733 TTTATGCGCCGTGTTGAGGCTAATGGCGACTGGAGTCTTATGGATCCGCACGAATGTCCT 792
Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999
|| || |||||| | | || | | ||||| |||||||||| ||||||| ||
Sbjct 793 GGCCTTTCTGATTTGTGGGGTGATCAATTTGATTCACTTTACGAAAGGTATGAAAGGGAG 852
Query 111000 GGCAA 111004
|||||
Sbjct 853 GGCAA 857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1182001639672478
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |