Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq93010 125 2e-23 >seq93010 Length=2134 Score = 125 bits (138), Expect = 2e-23 Identities = 319/485 (66%), Gaps = 3/485 (1%) Strand=Plus/Plus Query 110523 TGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAA 110582 || |||||| | ||| || ||||| ||||| || ||||||||| | || || Sbjct 373 TGTTTTCTTGTCACAATGAAGGATGACAGCATTGAGGGCATTTATGATACACTCCGGCAA 432 Query 110583 ACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCA 110642 ||| ||||||||||||| |||| || |||||| | | |||||| || ||| Sbjct 433 TGTGCCCTTATTTCTAAAAGTGCTGGGGGTATTGGTGTAAATGTTCATTGCATACGCGGC 492 Query 110643 AAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGA 110702 | || | |||| || |||| ||| || | ||||||||| ||||||||| | Sbjct 493 ACTGGTACCTATATTGCTGGTACGAATGGTTACTCCAATGGACTTGTGCCAATGTTACGT 552 Query 110703 GTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTT 110759 || || ||| | ||||| || || |||| |||||||| ||| ||| | ||| Sbjct 553 GTTTTTAACAATACTGCTCGCTACGTCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTT 612 Query 110760 GCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAAT 110819 || ||||||||||| || |||||| | || || | ||| ||||| | || || || Sbjct 613 GCCATCTATCTCGAGCCATGGCATACGGACATTCTCTCCTTCGTAGAATTACGCAAGAAC 672 Query 110820 CAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTA 110879 || ||||| | || | ||| | |||||||| | ||||| | ||| | Sbjct 673 ACTGGTGCAGAAGAGGTTCGTGCTAGGGATCTTTTTTATGCCCTTTGGATCCCCGATCTG 732 Query 110880 TTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCT 110939 || ||| |||||| | | |||||| ||| ||||||| ||| || | |||| Sbjct 733 TTTATGCGCCGTGTTGAGGCTAATGGCGACTGGAGTCTTATGGATCCGCACGAATGTCCT 792 Query 110940 GGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAA 110999 || || |||||| | | || | | ||||| |||||||||| ||||||| || Sbjct 793 GGCCTTTCTGATTTGTGGGGTGATCAATTTGATTCACTTTACGAAAGGTATGAAAGGGAG 852 Query 111000 GGCAA 111004 ||||| Sbjct 853 GGCAA 857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182001639672478