Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq157544 134 1e-26 seq256849 113 5e-20 seq270304 93.3 4e-14 seq171037 91.5 1e-13 >seq157544 Length=1252 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || ||||| || ||||||||||||||||||||||| | ||| || || || Sbjct 1241 ACAAGATGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGACAGAGTGCGACCATCCTCT 1182 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 |||||||||||||||||||| | |||||||||||| || || ||||| || || || ||| Sbjct 1181 AGCTGTTTGCCTGCAAAAATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGA 1122 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||| || || | || ||| ||| || || ||||| || || || || Sbjct 1121 ATTTTAGCTTTCACATTCTCTATCGTATCGCTCGACTCAACCTCGAGTGTGATAGTCTTT 1062 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| |||||||| Sbjct 1061 CCAGTAAGGGTCTTTACGAATATTTGCAT 1033 >seq256849 Length=689 Score = 113 bits (124), Expect = 5e-20 Identities = 111/141 (79%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || |||| ||| || | || |||||||| || ||||||||||||||||||||||| | | Sbjct 642 CCACCTCGGAGACGGAGGACAAGGTGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGAC 583 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || || || || ||||| |||||||||||||| | ||||||||| || || || Sbjct 582 AAAG-TGCGACCATCCTCTAGCTGCTTGCCTGCAAAAATTAGACGCTGCTGGTCTGGTGG 524 Query 134606 TATGCCTTCTTTTTCTTGAAT 134626 ||||| || || || ||||| Sbjct 523 GATGCCCTCCTTATCCTGAAT 503 >seq270304 Length=645 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || || ||||||||||| || || ||||| || || || || || Sbjct 96 ACTAGATGAAGAGTAGATTCCTTTTGTATATTATAGTCAGAAAGTGTACGACCATCTTCA 155 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || || ||||| | | |||||||| | || || ||||| || ||||| Sbjct 156 AGCTGCTTTCCAGCGAAAATAAGCCTTTGCTGATCTGAGGGAATACCTTCCTTATCTTGT 215 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| || || || | || | | || ||| || || || || || ||||| Sbjct 216 ATCTTTGCCTTCACATTTTCGACAGTATTTGTCGGTTCAACTTCTAGGGTTATAGTTTTT 275 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| |||||||| ||||||||||| Sbjct 276 CCGGTTAATGTTTTAACAAAAATTTGCAT 304 >seq171037 Length=1136 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG-TG 134554 || || | ||| || || || || || || || ||||| ||||| || | ||| || Sbjct 778 AGACGAAGCACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTG 719 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || ||||| ||||| || |||||||| | | || ||||| || || || ||||| Sbjct 718 CCA-TCTTCGAGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTC 660 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || |||||||| || || || || | |||||| |||||||| || ||||| Sbjct 659 CTTGTCTTGAATCTTCGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAGAGT 600 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 ||| || || || || | ||||| || || ||||||||||| Sbjct 599 AATTGTCTTTCCAGTCAGTGTTTTGACAAATATTTGCATTTT 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503399561962960