Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq157544 134 1e-26
seq256849 113 5e-20
seq270304 93.3 4e-14
seq171037 91.5 1e-13
>seq157544
Length=1252
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || ||||| || ||||||||||||||||||||||| | ||| || || ||
Sbjct 1241 ACAAGATGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGACAGAGTGCGACCATCCTCT 1182
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
|||||||||||||||||||| | |||||||||||| || || ||||| || || || |||
Sbjct 1181 AGCTGTTTGCCTGCAAAAATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCCTGA 1122
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
||||| ||| || || | || ||| ||| || || ||||| || || || ||
Sbjct 1121 ATTTTAGCTTTCACATTCTCTATCGTATCGCTCGACTCAACCTCGAGTGTGATAGTCTTT 1062
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || ||||| ||||||||
Sbjct 1061 CCAGTAAGGGTCTTTACGAATATTTGCAT 1033
>seq256849
Length=689
Score = 113 bits (124), Expect = 5e-20
Identities = 111/141 (79%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| |||| ||| || | || |||||||| || ||||||||||||||||||||||| | |
Sbjct 642 CCACCTCGGAGACGGAGGACAAGGTGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGAC 583
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | || || || || ||||| |||||||||||||| | ||||||||| || || ||
Sbjct 582 AAAG-TGCGACCATCCTCTAGCTGCTTGCCTGCAAAAATTAGACGCTGCTGGTCTGGTGG 524
Query 134606 TATGCCTTCTTTTTCTTGAAT 134626
||||| || || || |||||
Sbjct 523 GATGCCCTCCTTATCCTGAAT 503
>seq270304
Length=645
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| || || || || ||||||||||| || || ||||| || || || || ||
Sbjct 96 ACTAGATGAAGAGTAGATTCCTTTTGTATATTATAGTCAGAAAGTGTACGACCATCTTCA 155
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || ||||| | | |||||||| | || || ||||| || |||||
Sbjct 156 AGCTGCTTTCCAGCGAAAATAAGCCTTTGCTGATCTGAGGGAATACCTTCCTTATCTTGT 215
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| ||| || || || | || | | || ||| || || || || || |||||
Sbjct 216 ATCTTTGCCTTCACATTTTCGACAGTATTTGTCGGTTCAACTTCTAGGGTTATAGTTTTT 275
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|||||||| |||||||| |||||||||||
Sbjct 276 CCGGTTAATGTTTTAACAAAAATTTGCAT 304
>seq171037
Length=1136
Score = 91.5 bits (100), Expect = 1e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTG-TG 134554
|| || | ||| || || || || || || || ||||| ||||| || | ||| ||
Sbjct 778 AGACGAAGCACAAGATGAAGAGTTGACTCTTTCTGAATATTGTAATCTGATAGGGTCCTG 719
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
| || ||||| ||||| || |||||||| | | || ||||| || || || |||||
Sbjct 718 CCA-TCTTCGAGTTGTTTTCCAGCAAAAATAAGCCTTTGTTGATCAGGTGGAATACCTTC 660
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| |||||||| || || || || | |||||| |||||||| || |||||
Sbjct 659 CTTGTCTTGAATCTTCGACTTTACGTTCTCTATTGTGTCACTTGATTCCACTTCAAGAGT 600
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
||| || || || || | ||||| || || |||||||||||
Sbjct 599 AATTGTCTTTCCAGTCAGTGTTTTGACAAATATTTGCATTTT 558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 503399561962960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |