Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq150668 224 1e-53
seq75644 224 1e-53
seq110960 215 7e-51
seq93010 203 4e-47
>seq150668
Length=1318
Score = 224 bits (248), Expect = 1e-53
Identities = 317/439 (72%), Gaps = 16/439 (4%)
Strand=Plus/Minus
Query 39329 TGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 39388
|||||||| |||||||| |||||||||||||| |||||||| |||| ||||||||||||
Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104
Query 39389 ATGAAATCAAACGGATT-----AGTTGCATTATAtttttttttAAATCCTAATTCTGAAA 39443
|| |||||||||||||| |||| || || || || ||| || | ||| || |
Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAA---ATCTTCTTGTAA--CCAAGTTCAGACA 1049
Query 39444 TCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA 39503
| | ||| || ||||| |||||||| ||| | | |||||||| || ||||
Sbjct 1048 GAAGACGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGA 989
Query 39504 GTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTA 39563
| | || || | ||| || || ||||| |||| || || | ||| ||||| ||||
Sbjct 988 GACTGACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTA 929
Query 39564 TCGATGTTACTACCTCATCACT--CGGTGGATGCAATAA-ATGTTTAAACATTAAGCAGG 39620
| || | |||| || || |||| |||||| | ||| ||||| | | ||| |
Sbjct 928 TAGAATGGAT--CCTCTTCTCTTCCGGTTT-TGCAATGATATGCTTAAATAGGAGGCAAG 872
Query 39621 CGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAG 39680
|||| || ||||| || |||||||||| ||| || | || || || ||||| || |
Sbjct 871 CGAAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGG 812
Query 39681 GCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGC 39740
|||| |||||||||||||| ||||||||||| || ||||| || || ||||| | |
Sbjct 811 GCATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACAC 752
Query 39741 CTTCTACTGCTGCAAATGC 39759
||||||| |||||||| ||
Sbjct 751 CTTCTACAGCTGCAAAAGC 733
>seq75644
Length=2520
Score = 224 bits (248), Expect = 1e-53
Identities = 603/914 (66%), Gaps = 50/914 (5%)
Strand=Plus/Plus
Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384
|||||||||||| ||||| || ||||| || || || |||||||| || | || |||||
Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642
Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATT--ATAtttttttttAAATCCTAATTCTGAA 39442
||||| |||||||| ||||| ||||| | || || | ||| || | || |
Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAA--CCAAGCTCGTAT 700
Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502
| ||| | ||| ||||||||||| | ||| |||||| ||||| ||||| || ||
Sbjct 701 AGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATC 760
Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562
||||| || |||| ||||| | | || | ||||| || || | ||||| | | |
Sbjct 761 AGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAAT 820
Query 39563 ATCGATGTTAC---TACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAG 39619
|| | || | ||| ||| || | || | |||||| |||| | |||
Sbjct 821 ATAGCATAAACACGTTCCTTATC---GGGCTTTTTCACGATATGTTTGAACAGAAGGCAA 877
Query 39620 GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCA 39679
|| ||||| || ||||| || || | |||||| | ||| || || || | ||
Sbjct 878 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 937
Query 39680 GGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATG 39739
||||| || |||||||| || ||||||||||| | |||||| || ||||||||||
Sbjct 938 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 997
Query 39740 CCTTCTACTGCTGCAAATGCAACAAGTCTCTC----TCCGT--AACTTGTATCATTATGT 39793
||||| | ||| ||||| || ||| | ||| ||| | |||||||| |
Sbjct 998 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCA--- 1054
Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT-ATAGCATT 39852
||||| | | ||||| | || || || | ||||||| | |||| | || |||||
Sbjct 1055 ATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAA-TCGAGGTTTGTGATGGCATT 1113
Query 39853 A---AAGAGAT-------AATGTT---TTT-------CAT-------CACT--ATCTTTA 39883
| |||| || || || ||| ||| |||| ||||
Sbjct 1114 AAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGG 1173
Query 39884 ACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGA 39943
| ||||||||| || | |||| |||||| || || || || ||||| || ||||||||
Sbjct 1174 ATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGC 1233
Query 39944 AATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAA 40003
| |||||||| |||| | || | | ||| || ||| || ||| | |||| ||| |
Sbjct 1234 ATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGA 1293
Query 40004 TTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATAT 40063
||||| ||| ||||||||||| || || || || || | || | ||||||| |
Sbjct 1294 TTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGT 1353
Query 40064 TTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCA 40123
|| | || | | | || ||| | || ||||| || | ||| || ||||||
Sbjct 1354 CGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCA 1413
Query 40124 GCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATT 40183
||| ||| || || || | ||||||||||| | | ||| ||||| ||||||| |||
Sbjct 1414 ACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATT 1473
Query 40184 GGAAAAATAACAAA 40197
|| || || |||||
Sbjct 1474 GGCAATATCACAAA 1487
>seq110960
Length=1818
Score = 215 bits (238), Expect = 7e-51
Identities = 600/917 (65%), Gaps = 55/917 (6%)
Strand=Plus/Minus
Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384
|||||||||||| ||||| || ||||| || || || |||||||| || | || |||||
Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177
Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATT--ATAtttttttttAAATCCTAATTCTGAA 39442
||||| |||||||| ||||| ||||| | || || | ||| || | || |
Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAA--CCAAGCTCGTAC 1119
Query 39443 ATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502
| ||| | ||| ||||||||||| | ||| |||||| ||||| ||||| || ||
Sbjct 1118 AGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATC 1059
Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562
||||| || |||| ||||| | | || | ||||| || || | ||||| | | |
Sbjct 1058 AGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAAT 999
Query 39563 ATCGATGTTAC---TACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAG 39619
|| | || | ||| ||| || | || | |||||| |||| | |||
Sbjct 998 ATAGCATAAACACGTTCCTTATC---GGGCTTTTTCACGATATGTTTGAACAGAAGGCAA 942
Query 39620 GCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCA 39679
|| ||||| || ||||| || || | |||||| | ||| || || || | ||
Sbjct 941 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 882
Query 39680 GGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATG 39739
||||| || |||||||| || ||||||||||| | |||||| || ||||||||||
Sbjct 881 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 822
Query 39740 CCTTCTACTGCTGCAAATGCAACAAGTCTCTC----TCCGT--AACTTGTATCATTATGT 39793
||||| | ||| ||||| || ||| | ||| ||| | |||||||| |
Sbjct 821 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCA--- 765
Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAA--------------GGCATT- 39838
||||| | | ||||| | || || || | ||||||| ||||||
Sbjct 764 ATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTCGTGATGGCATTA 705
Query 39839 --------GTTTCTA--------TAGCATTAAAGAGATAATGTTTTTCATCACT--ATCT 39880
| |||| ||| ||||| | | || ||||| |||| ||||
Sbjct 704 AACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATA-CATACTTTTC--CACTGGATCT 648
Query 39881 TTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATC 39940
| ||| ||||| || | |||| |||||| || ||||| || ||||| || ||||||
Sbjct 647 CGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATC 588
Query 39941 TGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCC 40000
|| | |||||||| |||| | || | | ||| || ||| || ||| | |||| ||
Sbjct 587 TGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACC 528
Query 40001 AAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAA 40060
| |||||| ||| ||||||||||| || || || || || | || | ||||||
Sbjct 527 AGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAA 468
Query 40061 TATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCT 40120
| | || | || | | | || ||| | || ||||| || | ||| || |||
Sbjct 467 TGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCT 408
Query 40121 TCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGT 40180
||| ||| ||| || || || | ||||||||||| | | ||| ||||| |||||||
Sbjct 407 TCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGG 348
Query 40181 ATTGGAAAAATAACAAA 40197
||||| || || || ||
Sbjct 347 ATTGGCAATATCACGAA 331
>seq93010
Length=2134
Score = 203 bits (224), Expect = 4e-47
Identities = 458/685 (67%), Gaps = 4/685 (1%)
Strand=Plus/Minus
Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576
|| |||| ||| ||||| | |||| | ||||||||||| | ||| ||| | |
Sbjct 824 TCAAATTGATCACCCCACAAATCAGAAAGGCCAGGACATTCGTGCGGATCCATAAGACTC 765
Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636
|| | ||| | ||| ||| || |||||| |||||||| |||||||| || |||
Sbjct 764 CAGTCGCCATTAGCCTCAACACGGCGCATAAACAGATCGGGGATCCAAAGGGCATAAAAA 705
Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696
||||| || | | | ||||| || || || || | || | || | |
Sbjct 704 AGATCCCTAGCACGAACCTCTTCTGCACCAGTGTTCTTGCGTAATTCTACGAAGGAGAGA 645
Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756
|| || | ||||||||| || ||||| || || | | | || || | | || || |||
Sbjct 644 ATGTCCGTATGCCATGGCTCGAGATAGATGGCAAAGGCACCAGGCCTCCTGTTACCACCC 585
Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816
||||| | ||| | ||||| || ||| | || | | ||| || | || ||||| ||
Sbjct 584 TGATCGACGTAGCGAGCAGTATTGTTAAAAACACGTAACATTGGCACAAGTCCATTGGAG 525
Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876
| |||||| || |||| |||||| | || | |||| || | || | || |||
Sbjct 524 TAACCATTCGTACCAGCAATATAGGTACCAGTGCCGCGTATGCAATGAACATTTACACCA 465
Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936
|| || || || ||||||| || || ||||| | | ||| ||||| || |||||
Sbjct 464 ATACCCCCAGCACTTTTAGAAATAAGGGCACATTGCCGGAGTGTATCATAAATGCCCTCA 405
Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996
||||| ||||| |||| | | |||||||||||| ||||| || | | || ||
Sbjct 404 ATGCTGTCATCCTTCATTGTGACAAGAAAACAGCTGGACATCTGGGGCCTTGGTGTACCA 345
Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056
| |||||| | || || || |||||||| ||||| || || | || ||||| |||
Sbjct 344 GAATTAAAGAGAGTGGGGGAAGCGTGAGTAAACCACTTCAAGGACATCAAGTTGTAGGTT 285
Query 70057 TCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATG 70115
||| ||| ||||| || || | ||||| || || | ||| | ||||| ||||||
Sbjct 284 TCACAGACTGCCTCTATGTCATCAAAG-TGAATACCAATTGAGACTCTCATCAGCATATG 226
Query 70116 CTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTT 70175
|||||| ||||| |||||||| ||||| | || ||||| | |||| || ||
Sbjct 225 CTGAGGACGTTCATGAACTTTATTATCGATTTTAAGAAGATATGAGTGCTCCAATGTCTT 166
Query 70176 AAACCCAAAATAGTTGTA--TGAAA 70198
||| ||||| || ||||| |||||
Sbjct 165 AAAGCCAAAGTAATTGTAGTTGAAA 141
Score = 84.2 bits (92), Expect = 3e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 68707 GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATAT 68766
||| | || || |||||||||||||| | ||||| | | | | ||| || || |
Sbjct 1790 GGACTGACAATCTGAAATTCCCCAGAGAGGACTCTTCTTGAAAAGACATTGCTTGTCAAG 1731
Query 68767 GGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCC 68826
||||| ||||| | ||||| || ||||| || |||||||||||||||||||||||
Sbjct 1730 GGTTCAGTGGATTCGGTGTTTCCTAGTATTTGTGCCGTTGATGCAGTTGGCATAGGTGCT 1671
Query 68827 ACCAATAAACTATTTCTAAGACCATG 68852
| | |||||||| | ||||| ||
Sbjct 1670 ATTAGCAAACTATTGCGCAGACCTTG 1645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 684192092868720
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