Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq150668 275 5e-69 seq75644 237 1e-57 seq110960 230 2e-55 >seq150668 Length=1318 Score = 275 bits (304), Expect = 5e-69 Identities = 611/915 (67%), Gaps = 54/915 (6%) Strand=Plus/Plus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 ||||| ||||||| ||| | |||| |||||| ||| || | || || ||||| ||| Sbjct 262 TTTGTAATGTTTCCCATTGAGTATCCTGACATTTGGAAATTCTATAAGAAAGCTGTGGCT 321 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 || || ||||||| ||| |||||||||||| |||||||||| | ||||||| | || | Sbjct 322 TCCTTCTGGACAGTAGAGGAAGTTGATTTGTCTAAAGACTTTCCTCATTGGAATTCACTT 381 Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 || || ||| || ||| |||||| ||| | || ||||| ||||| || || ||| Sbjct 382 AAGCCGGGAGAGCGACGCTTTCTATCTTACGTTCTTGCATTTTTCGCTGCTAGTGATGGG 441 Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGA 43939 ||||| |||||| | | |||||| ||||||||||| | ||||||| || Sbjct 442 ATAGTTTTGGAAAATCTTATCGAGCGGTTTAGCCAAGAAGTTCAGATCCCAGAAGTTCGC 501 Query 43940 TGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTG 43999 ||||||||||| | ||||| || || || ||||| ||||| ||||||||| |||||| Sbjct 502 TGTTTTTATGGCATACAAATCGCTATTGAGAATATACATTCTGAAATGTACTCTCTTCTT 561 Query 44000 ATAGATACGTACATCAAAGATGGGCACGAGAA--------GCATCGA------------- 44038 || ||||| ||||||| |||| || || |||| | Sbjct 562 ATTGATACTTACATCAGAGATTCTGTTGAAAAGTAAGTTGGCATATATCTTTTGTTGTGT 621 Query 44039 ---------TTGTTTAATGCGAT-AGAAACAGTACCTGCGATTAAACATAAAGCAGACTG 44088 ||| ||||||| || | ||| |||| | | | | || || | || Sbjct 622 AGGGACTTTTTGCTTAATGCAATCGGCAACTTGGAGTGCG-TCAGAAAAAAGGCGCAATG 680 Query 44089 GGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGC 44145 ||| || | ||||| | || ||||| | | || ||||| | | || ||||| Sbjct 681 GGCTCTCGACTGGATTGGAGATACAAATTCTCCATTCTCTGAACGTGTCGCAGCTTTTGC 740 Query 44146 AGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACG 44205 || ||| ||||| ||||||| ||||| ||||| || ||||||||| | || || || Sbjct 741 AGCTGTAGAAGGTGTTTTCTTCTCAGGCAGCTTTGCCGCGATATTTTGGCTTAAAAAGCG 800 Query 44206 AGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACA 44265 ||| | ||||| || | || || |||||| | |||||||| ||||| || | || Sbjct 801 TGGTCTTATGCCCGGCCTCACCTTCAGCAATGAGCTTATAAGTCGAGATGAGGGACTGCA 860 Query 44266 TTGCGATTTTGCTTGCTTGTTACTT--GGATATC-TAGGAGACGATAAGCCTTCATGTAA 44322 ||||||||| |||||| | || || | ||||| | | | || || | || Sbjct 861 TTGCGATTTCGCTTGCCTCCTATTTAAGCATATCATTGCA------AAACCGGAAGAGAA 914 Query 44323 GACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGC 44382 || || ||| | | ||||||||||| || || ||||||||| | || || Sbjct 915 GAGGATCCATTCTATAATGGAGGAGGCAGTAAAAATTGAGCAAGAATTTCTCACTGATGC 974 Query 44383 ATTACCTGTAAATTTAATAGGAATGAA-TGAACTTTTGATGAACCAATATATTGAATACA 44441 || || || | | | || || ||||| || || || ||| | || || || | Sbjct 975 TTTGCCCGTCAGTCTCATTGGGATGAATTGCGCTCTT-ATGTGTCGCTACATAGAGTTTG 1033 Query 44442 TTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTAC----AAAAC 44497 | || |||||| | || | ||||| |||| | || | || | | || |||| Sbjct 1034 TGGCTGATCGTCTTCTGTCTGAACTTGGTTAC----AAGAAGATTTGGAACTCCGAAAAT 1089 Query 44498 CCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGC 44557 ||||||||||||||||||||||| || |||| |||||||| || ||||| || || ||| Sbjct 1090 CCGTTTGATTTTATGGAAAATATATCTCTGGAGGGCAAAACCAATTTTTTCGAGAAGCGC 1149 Query 44558 GTTGGAGAATATCAG 44572 ||||| ||||| ||| Sbjct 1150 GTTGGCGAATACCAG 1164 >seq75644 Length=2520 Score = 237 bits (262), Expect = 1e-57 Identities = 612/921 (66%), Gaps = 65/921 (7%) Strand=Plus/Minus Query 43698 GGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGG 43757 ||||||| | || ||||| ||||||| || || |||||| | |||||||| || | Sbjct 1489 GGTTTGTGATATTGCCAATCCAATATCCGGATATCTGGCAATTTTACAAAAAGGCTGTTG 1430 Query 43758 CGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCAT 43817 | ||||| ||| ||| ||||| ||||||||| | |||||| | | || ||| |||| Sbjct 1429 CTTCATTCTGGTCAGTTGAAGAGGTTGATTTGTCCAAAGACATTGTGCAATGGGATGCAC 1370 Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 | || ||| ||| |||||||||||| | ||| | || || || ||||| || || | Sbjct 1369 TTAAGCCAGGAGAGCGACATTTTATATCGTACGTTCTCGCTTTCTTCGCTGCCAGTGATG 1310 Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCAC 43937 | || || |||||| |||| |||||| |||||||||||| |||| || | | Sbjct 1309 GAATTGTGCTGGAAAATCTGGTGGAACGGTTTAGTCAAGAAGTTCAAGTACCCGAGGTCC 1250 Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997 |||| ||||| || | || || || |||||||||||||| ||||| ||||| |||||| Sbjct 1249 GATGCTTTTACGGCATGCAGATGGCAATAGAAAATATTCACTCGGAGATGTATTGTCTTC 1190 Query 43998 TGATAGATACGTACATCAAAGAT---GGGCACGAG-----------------AAG---CA 44034 |||| ||||| || ||| |||| | | | || ||| | Sbjct 1189 TGATTGATACATATATCCGAGATCCAGTGGAAAAGTATGTATTTTTAAATCTAAGTTTCT 1130 Query 44035 TCGA------TTGTTTAATGCGATAGAAACAGTACCTGCGAT----TAAACATAAA-GCA 44083 | || ||||||||||| || ||| |||| |||| || ||| ||| || Sbjct 1129 TAGAGATTTCTTGTTTAATGCCAT---CACA-AACCT-CGATTGTGTACACAAAAAGGCG 1075 Query 44084 GACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCG 44140 | ||||||||| | ||||| || |||| | |||| || || ||| || Sbjct 1074 CAGTGGGCCCTTGACTGGATTGGTGATACAAAGTCAACGTTTGCCGAGCGTATTGCAGCC 1015 Query 44141 TTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAG 44200 ||||| | | ||||| | |||||||| || |||||| | ||||||||| | ||| Sbjct 1014 TTTGCTGCAATCGAAGGAGTCTTCTTTTCCGGCAGTTTTGCGTCTATATTTTGGCTTAAG 955 Query 44201 AAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGC 44260 || || || ||||||| || ||||| || ||||| | || ||||| || |||||| Sbjct 954 AAGCGTGGCCTGATGCCAGGCTTGACCTTCAGCAATGAACTTATTAGTCGCGACGAAGGC 895 Query 44261 TTACATTGCGATTTTGCTTG-CTTGT-TACTTGGATATCTAGGAGA----CGATAAGCCT 44314 | || ||| |||||||| ||| | | | ||||| | | | ||||||| Sbjct 894 CTTCACACCGACTTTGCTTGCCTTCTGTTCAAACATATCGTGAAAAAGCCCGATAAG-GA 836 Query 44315 TCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATG 44374 | ||| ||| | ||| | |||||| | |||||||| ||| ||| | Sbjct 835 ACGTGT-------TTA-TGCTATATTCAAGGAGGCATTGGAGATAGAA-AAGGCTTTCTT 785 Query 44375 ACAACA-GCATTACCTGTAAATTTAATAGGAATGAA---TGAACTTTTGATGAACCAATA 44430 | | || ||||| ||||| | || || ||||| ||| | ||||| || || Sbjct 784 TAATGAGGCCTTACCCGTAAAACTGATTGGCATGAACTGTGA---TATGATGTGCCGTTA 728 Query 44431 TATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGT 44490 | |||| |||| ||||| || || | || || |||| ||| || | | || Sbjct 727 CCTCGAATTTGTTGCCGATCGCTTGCTATACGAGCTTGGTTACGAGAAGATTTGGAATGC 668 Query 44491 ACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGA 44550 | || || |||||||||||||| ||||| ||| | || |||||||||||||| ||||| Sbjct 667 TGAGAATCCCTTTGATTTTATGGAGAATATCTCGATCGAGGGCAAAACAAACTTCTTTGA 608 Query 44551 AAAACGCGTTGGAGAATATCA 44571 || || ||||| ||||| || Sbjct 607 GAAGCGTGTTGGGGAATACCA 587 >seq110960 Length=1818 Score = 230 bits (254), Expect = 2e-55 Identities = 611/922 (66%), Gaps = 66/922 (7%) Strand=Plus/Plus Query 43698 GGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGG 43757 |||| || | || ||||| ||||||| || || |||||| | |||||||| || | Sbjct 329 GGTTCGTGATATTGCCAATCCAATATCCGGATATCTGGCAATTTTACAAAAAGGCTGTCG 388 Query 43758 CGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCAT 43817 | ||||| ||| ||| ||||| ||||||||| | |||||| | | || ||| |||| Sbjct 389 CTTCATTCTGGTCAGTTGAAGAGGTTGATTTGTCCAAAGACATTGTGCAATGGGATGCAC 448 Query 43818 TAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACG 43877 | || ||| ||| |||||||||||| | ||| | || || || ||||| || || | Sbjct 449 TTAAGCCAGGAGAGCGACATTTTATATCGTACGTTCTCGCTTTCTTCGCTGCCAGTGATG 508 Query 43878 GGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCAC 43937 | || || |||||| |||| |||||| |||||||||||| |||| || | | Sbjct 509 GAATTGTGCTGGAAAATCTGGTGGAACGGTTTAGTCAAGAAGTTCAAGTACCCGAGGTCC 568 Query 43938 GATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTC 43997 |||| ||||| || | || || || |||||||||||||||||||| ||||| |||||| Sbjct 569 GATGCTTTTACGGCATGCAGATGGCAATAGAAAATATTCATTCGGAGATGTATTGTCTTC 628 Query 43998 TGATAGATACGTACATCAAAGAT---GGGCACGAG-----------------AAG----C 44033 |||| |||||||| ||| |||| | | | || ||| | Sbjct 629 TGATTGATACGTATATCCGAGATCCAGTGGAAAAGTATGTATTTTTAAATCTAAGTTTTC 688 Query 44034 ATCGA------TTGTTTAATGCGATAGAAACAGTACCTGCGAT----TAAACATAAA-GC 44082 | || ||||||||||| || || | |||| |||| || ||| ||| || Sbjct 689 TTAGAGATTTCTTGTTTAATGCCAT---CAC-GAACCT-CGATTGTGTACACAAAAAGGC 743 Query 44083 AGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGC 44139 | ||||||||| | ||||| || |||| | |||| || || ||| || Sbjct 744 GCAGTGGGCCCTTGACTGGATTGGTGATACAAAGTCAACGTTTGCCGAGCGTATTGCAGC 803 Query 44140 GTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAA 44199 ||||| | | ||||| | |||||||| || |||||| | ||||||||| | || Sbjct 804 CTTTGCTGCAATCGAAGGAGTCTTCTTTTCCGGCAGTTTTGCGTCTATATTTTGGCTTAA 863 Query 44200 GAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGG 44259 ||| || || ||||||| || ||||| || ||||| | || ||||| || ||||| Sbjct 864 GAAGCGTGGCCTGATGCCAGGCTTGACCTTCAGCAATGAACTTATTAGTCGCGACGAAGG 923 Query 44260 CTTACATTGCGATTTTGCTTG-CTTGT-TACTTGGATATCTAGGAGA----CGATAAGCC 44313 | | || ||| |||||||| ||| | | | ||||| | | | ||||||| Sbjct 924 CCTTCACACCGACTTTGCTTGCCTTCTGTTCAAACATATCGTGAAAAAGCCCGATAAG-G 982 Query 44314 TTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTAT 44373 | ||| ||| | ||| | |||||| | |||||||| ||| ||| | Sbjct 983 AACGTGT-------TTA-TGCTATATTCAAGGAGGCATTGGAGATAGAA-AAGGCTTTCT 1033 Query 44374 GACAACA-GCATTACCTGTAAATTTAATAGGAATGAA---TGAACTTTTGATGAACCAAT 44429 | | || ||||| || || | || || ||||| ||| | ||||| || | Sbjct 1034 TTAATGAGGCCTTACCCGTCAAACTGATTGGCATGAACTGTGA---TATGATGTGCCGCT 1090 Query 44430 ATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTG 44489 | | |||| |||| ||||| || || | || || |||| ||| || | | || Sbjct 1091 ACCTCGAATTTGTTGCCGATCGCTTGCTGTACGAGCTTGGTTACGAGAAGATTTGGAATG 1150 Query 44490 TACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTG 44549 | || || |||||||||||||| ||||| ||| | || |||||||| ||||| |||| Sbjct 1151 CTGAGAATCCCTTTGATTTTATGGAGAATATCTCGATCGAGGGCAAAACGAACTTCTTTG 1210 Query 44550 AAAAACGCGTTGGAGAATATCA 44571 | || || ||||| ||||| || Sbjct 1211 AGAAGCGTGTTGGGGAATACCA 1232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395923369669990