Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq93010 123 3e-23 >seq93010 Length=2134 Score = 123 bits (136), Expect = 3e-23 Identities = 349/533 (65%), Gaps = 5/533 (1%) Strand=Plus/Minus Query 111555 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACC 111614 ||||||| || ||| || || || || ||||| |||| |||| ||||| ||| | Sbjct 751 CCTCAACACGGCGCATAAACAGATCGGGGATCCAAAGGGCATAAAAAAGATCCCTAGCAC 692 Query 111615 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 111674 || ||||||| |||| ||| ||||| || | ||| | || |||| |||| Sbjct 691 GAACCTCTTCTGCACCAGTGTTCTTGCGTAATTCTACGAAGGAGAGAATGTCCGTATGCC 632 Query 111675 ATGGCTCAAGATAGACTGCGATAGATCC---CTTTCGACGCCCAGCTTGATTTACATAGC 111731 ||||||| ||||||| || | | || | | | ||| | |||| || |||| Sbjct 631 ATGGCTCGAGATAGATGGCAAAGGCACCAGGCCTCCTGTTACCACCCTGATCGACGTAGC 572 Query 111732 GCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCC 111791 | || || |||||| || || | |||||| | || |||| || | |||||| || | Sbjct 571 GAGCAGTATTGTTAAAAACACGTAACATTGGCACAAGTCCATTGGAGTAACCATTCGTAC 512 Query 111792 CCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCC 111851 | |||| | | || | | | ||| | | | |||||||||||||| | Sbjct 511 CAGCAATATAGGTACCAGTGCCGCGTATGCAATGAACATTTACACCAATACCCCCAGCAC 452 Query 111852 ACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCT 111911 || || || | ||||| | | || || |||| || || | || ||| |||| Sbjct 451 TTTTAGAAATAAGGGCACATTGCCGGAGTGTATCATAAATGCCCTCAATGCTGTCATCCT 392 Query 111912 TGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGG 111971 | | | || ||| || || ||||||||||| || ||||||||||||| ||| ||||| | Sbjct 391 TCATTGTGACAAGAAAACAGCTGGACATCTGGGGCCTTGGTGTACCAGAATTAAAGAGAG 332 Query 111972 TTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAA 112030 | || | |||||| | ||| || | ||||||| || ||| || || |||| | Sbjct 331 TGGGGGAAGCGTGAGTAAAC-CACTTCAAGGACATCAAGTTGTAGGTTTCACAGACTGCC 273 Query 112031 TCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || ||||| || ||| || || |||| ||| | ||| | ||| | ||| || Sbjct 272 TCTATGTCATCAAAGTGAATACCAATTGAGACTCTCATCAGCATATGCTGAGG 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625548149140800