Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq75644 93.3 5e-14
seq93010 89.7 6e-13
>seq75644
Length=2520
Score = 93.3 bits (102), Expect = 5e-14
Identities = 326/500 (65%), Gaps = 12/500 (2%)
Strand=Plus/Plus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| |||||||| |||||||| ||||||||||| || || || | |||||||||||||
Sbjct 590 TATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATTCTCCATA 649
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|||||||| || |||| | |||||||| | || | | |||| || | || | ||
Sbjct 650 AAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTA-ACCAAGCTCGTATAGCAAGCG 708
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | || | || | ||| ||||| | || ||||||| || || || ||
Sbjct 709 ATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAGTTTTAC 768
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| | || || | ||| |||| || || |||| || ||| | || || |
Sbjct 769 GGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAATATAGCATA 828
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGC-AAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025
|| ||| | | || || || | | | | ||||| || ||||| ||
Sbjct 829 AACACGTTCCTTATC-GGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGCAAAGTCGG 887
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||| || || ||||| || || |||||||| |||| || |||||||| || |
Sbjct 888 TGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCATCAGGC 947
Query 130086 CCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 130144
| |||||||| | ||| || || | | ||||| ||| || ||||||| || || |
Sbjct 948 CACGCTTCTTAAGCCAAAATATAGACGCAAAA-CTGCCGGAAAAGAAGACTCCTTCGATT 1006
Query 130145 CACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTAT---CAAACCACTTC 130201
|| || || | |||||| ||||| | |||||||||| ||| ||| |
Sbjct 1007 GCAGCAAAGGCTGCAATACGCTCGGCAAACG---TTGACTTTGTATCACCAATCCAGTCA 1063
Query 130202 ATCGCCCACTGCGCCTTTTT 130221
| |||||||||||||||||
Sbjct 1064 AGGGCCCACTGCGCCTTTTT 1083
>seq93010
Length=2134
Score = 89.7 bits (98), Expect = 6e-13
Identities = 166/241 (69%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368
|||||||||||| || | || || || | || || | | ||| | | || || ||
Sbjct 468 ACCAATACCCCCAGCACTTTTAGAAATAAGGGCACATTGCCGGAGTGTATCATAAATGCC 409
Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428
|| || |||| |||| ||| || || || ||||| ||||| || ||||| |||||
Sbjct 408 CTCAATGCTGTCATCCTTCATTGTGACAAGAAAACAGCTGGACATCTGGGGCCTTGGTGT 349
Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGT 119487
||||| || |||||||| || | ||||| | ||| || | ||||||| || ||
Sbjct 348 ACCAGAATTAAAGAGAGTGGGGGAAGCGTGAGTAAAC-CACTTCAAGGACATCAAGTTGT 290
Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547
|||| || |||| || ||||| || ||||||||| || ||||| | ||| | ||
Sbjct 289 AGGTTTCACAGACTGCCTCTATGTCATCAAAGTGAATACCAATTGAGACTCTCATCAGCA 230
Query 119548 T 119548
|
Sbjct 229 T 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615989304244880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |