Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq93010 98.7 1e-15
>seq93010
Length=2134
Score = 98.7 bits (108), Expect = 1e-15
Identities = 354/548 (65%), Gaps = 7/548 (1%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| | ||| | ||| | || | || |||||||| || ||||| || | |||
Sbjct 220 CCTCAGCATATGCTGATGAGAGTCTCAATTGGTATTCACTTTGATGACATAGAGGCAGTC 279
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| || || ||| || ||||||| | || ||| | |||||| | || || |||||
Sbjct 280 TGTGAAACCTACAACTTGATGTCCTTGAAGTG-GTTTACTCACGCTTCCCCCACTCTCTT 338
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| ||||||||||||| ||||| |||||||| || || ||| || | | ||||| ||
Sbjct 339 TAATTCTGGTACACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCACAATGAAGGATGA 398
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | || || |||| || || | | ||||| | || || || | |||||
Sbjct 399 CAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTTCTAAAAGTGCTGG 458
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||||||| | | | ||| | | | || | | |||| || || ||
Sbjct 459 GGGTATTGGTGTAAATGTTCATTGCATACGCGGCACTGGTACCTATATTGCTGGTACGAA 518
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|||| | || |||| || | |||||| | || || |||||| || || ||||| ||
Sbjct 519 TGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATACTGCTCGCTACGT 578
Query 104581 AAATCAAGCTGGGCGTCGAAAG---GGATCTATCGCAGTCTATCTTGAGCCATGGCACGC 104637
|||| | ||| | | | || | | || ||||||| ||||||||||| |
Sbjct 579 CGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCGAGCCATGGCATAC 638
Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-C 104696
||| || | ||| | || || || ||| |||| || |||| | ||||
Sbjct 639 GGACATTCTCTCCTTCGTAGAATTACGCAAGAACACTGGTGCAGAAGAGGTTC-GTGCTA 697
Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756
| ||||| || | || || ||||| || ||||| || ||| | ||||||| | ||
Sbjct 698 GGGATCTTTTTTATGCCCTTTGGATCCCCGATCTGTTTATGCGCCGTGTTGAGGCTAATG 757
Query 104757 GCAATTGG 104764
|| | |||
Sbjct 758 GCGACTGG 765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 580954018117520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |