Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq93010 111 2e-19
>seq93010
Length=2134
Score = 111 bits (122), Expect = 2e-19
Identities = 291/435 (67%), Gaps = 18/435 (4%)
Strand=Plus/Plus
Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGT 53238
|||||| || | | ||| | ||| | | ||||| ||| ||| ||| || | || ||
Sbjct 220 CCTCAGCATATGCTGATGAGAGTCTCAATTGGTATTCACTTTGATGACATAGAGGCA-GT 278
Query 53239 CCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298
| |||| || ||| |||| ||| | |||| ||||| ||||| | || || || ||
Sbjct 279 CTGTGAAACCTACAACTTGATGTCCTTGAAGTGGTTTACTCACGCTTCCCCCACTCTCTT 338
Query 53299 CAACGCTGGTACGAATCAC--CCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356
|| ||||||| | || || |||||||| ||||| || || || | |||||||||
Sbjct 339 TAATTCTGGTAC--ACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCACAATGAAGGAT 396
Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416
||| || || ||||| || || || ||| | | ||||||| || || || | |
Sbjct 397 GACAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTTCTAAAAGTGCT 456
Query 53417 GGTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCAC----ACCAATCAAG-- 53470
|| ||||| ||| | | || || | | | || |||||| ||| || |
Sbjct 457 GGGGGTATTGGTGT-AAATGTTC---ATTGCATACG--CGGCACTGGTACCTATATTGCT 510
Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530
|| ||||| || | || ||||| | ||||| ||| | || || || ||||| || ||
Sbjct 511 GGTACGAATGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATACTGCT 570
Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590
|| |||||| | ||||||||| | | | || | || |||||||| ||||||||
Sbjct 571 CGCTACGTCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCGAGCCA 630
Query 53591 TGGCACGCCGACATT 53605
||||| | ||||||
Sbjct 631 TGGCATACGGACATT 645
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545051774400400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |