Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq93010 111 2e-19 >seq93010 Length=2134 Score = 111 bits (122), Expect = 2e-19 Identities = 291/435 (67%), Gaps = 18/435 (4%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGT 53238 |||||| || | | ||| | ||| | | ||||| ||| ||| ||| || | || || Sbjct 220 CCTCAGCATATGCTGATGAGAGTCTCAATTGGTATTCACTTTGATGACATAGAGGCA-GT 278 Query 53239 CCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTT 53298 | |||| || ||| |||| ||| | |||| ||||| ||||| | || || || || Sbjct 279 CTGTGAAACCTACAACTTGATGTCCTTGAAGTGGTTTACTCACGCTTCCCCCACTCTCTT 338 Query 53299 CAACGCTGGTACGAATCAC--CCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGAT 53356 || ||||||| | || || |||||||| ||||| || || || | ||||||||| Sbjct 339 TAATTCTGGTAC--ACCAAGGCCCCAGATGTCCAGCTGTTTTCTTGTCACAATGAAGGAT 396 Query 53357 GACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCG 53416 ||| || || ||||| || || || ||| | | ||||||| || || || | | Sbjct 397 GACAGCATTGAGGGCATTTATGATACACTCCGGCAATGTGCCCTTATTTCTAAAAGTGCT 456 Query 53417 GGTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGAACGGCAC----ACCAATCAAG-- 53470 || ||||| ||| | | || || | | | || |||||| ||| || | Sbjct 457 GGGGGTATTGGTGT-AAATGTTC---ATTGCATACG--CGGCACTGGTACCTATATTGCT 510 Query 53471 GGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530 || ||||| || | || ||||| | ||||| ||| | || || || ||||| || || Sbjct 511 GGTACGAATGGTTACTCCAATGGACTTGTGCCAATGTTACGTGTTTTTAACAATACTGCT 570 Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590 || |||||| | ||||||||| | | | || | || |||||||| |||||||| Sbjct 571 CGCTACGTCGATCAGGGTGGTAACAGGAGGCCTGGTGCCTTTGCCATCTATCTCGAGCCA 630 Query 53591 TGGCACGCCGACATT 53605 ||||| | |||||| Sbjct 631 TGGCATACGGACATT 645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545051774400400