Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq171037 96.9 2e-15
seq32333 96.9 2e-15
seq157544 82.4 5e-11
>seq171037
Length=1136
Score = 96.9 bits (106), Expect = 2e-15
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || ||||| |||||||| || | ||| || |||||| |||||||| ||||||||
Sbjct 979 TCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAAA 920
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
||||| || || ||||| || || | ||| || || ||| ||| ||| | ||| | | |
Sbjct 919 ATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGAT-TTTAGCTTTGATGTT 861
Query 34636 AAA-ATTGTGTCT-TCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
| |||||| | | | || ||||||| || || || || || || | ||||| |
Sbjct 860 TTCCACTGTGTCACTTGAT-TCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTTTTAA 802
Query 34694 CAAAAATCTGCATG 34707
||||||||||||||
Sbjct 801 CAAAAATCTGCATG 788
>seq32333
Length=4216
Score = 96.9 bits (106), Expect = 2e-15
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| || ||||| |||||||| || | ||| || |||||| |||||||| ||||||||
Sbjct 3797 TCTTTCTGAATATTATAATCGGATAATGTACGACTGTCTTCTAGTTGTTTTCCGGCAAAA 3856
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
||||| || || ||||| || || | ||| || || ||| ||| ||| | ||| | | |
Sbjct 3857 ATTAATCGTTGCTGGTCAGGGGGAATTCCTTCTTTATCTTGGAT-TTTAGCTTTGATGTT 3915
Query 34636 AAA-ATTGTGTCT-TCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693
| |||||| | | | || ||||||| || || || || || || | ||||| |
Sbjct 3916 TTCCACTGTGTCACTTGAT-TCGACTTCCAAAGTAATTGTCTTGCCCGTCAGAGTTTTAA 3974
Query 34694 CAAAAATCTGCATG 34707
||||||||||||||
Sbjct 3975 CAAAAATCTGCATG 3988
>seq157544
Length=1252
Score = 82.4 bits (90), Expect = 5e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | || | ||| ||||| |||||||||||||| || ||||| || || ||
Sbjct 1250 AGACGGAGGACAAGATGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGACAGAGTGCGA 1191
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || ||||| || ||||| |||| |||||| || ||||| || | ||||||
Sbjct 1190 CCATCCTCTAGCTGTTTGCCTGCAAAAATTAGACGCTGCTGATCCGGTGGGATGCCCTCC 1131
Query 34609 TTGTC 34613
|| ||
Sbjct 1130 TTATC 1126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 313515970992734
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |