Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq150668 208 6e-49
seq75644 194 1e-44
seq110960 190 2e-43
>seq150668
Length=1318
Score = 208 bits (230), Expect = 6e-49
Identities = 603/915 (66%), Gaps = 56/915 (6%)
Strand=Plus/Minus
Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319
||||||||| || ||||| ||||| ||||| |||||||| || | || |||||||||
Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104
Query 4320 ATAAAATCAAACGGATTAGTTGCGTTGTAA---TGTTTTTCAC--ACTTTAGAGCTACAA 4374
||||||||||||||||| | ||| || | || | || | || ||| |
Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGAC-----A 1049
Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434
| | || ||||| ||||| ||||| || | | ||| || |||| || || ||||| |
Sbjct 1048 GAAGACGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGA 989
Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
|| || || | || | || | ||| ||||| || || |||| || || ||||
Sbjct 988 GACTGACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTA 929
Query 4495 TATCTTTTATT---TTATCTTTAGATGGTTTATTTACTAAGTATCC--AAACAATAAACA 4549
|| | || || |||| | |||| | | | | ||| | ||| | | ||
Sbjct 928 TAGAATGGATCCTCTTCTCTTCCG---GTTT-TGCAATGA-TATGCTTAAATAGGAGGCA 874
Query 4550 CGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCC 4609
|| ||||| ||||||| || || |||| || || || || || || || | ||
Sbjct 873 AGCGAAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCC 814
Query 4610 GGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATAT 4669
|||||| | ||| | |||||||||||||||||| |||||||| || || ||||| |
Sbjct 813 GGGCATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAAC 754
Query 4670 GCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT--A 4727
|||||||| || ||||| ||| | | || ||| | | ||||| | | |
Sbjct 753 ACCTTCTACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGA--GAATTTGTATCTCCA 696
Query 4728 ATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAA--TTG-----TGTATAT 4780
||||| | | ||||| | || ||||| | |||||| | ||| || ||
Sbjct 695 ATCCAGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTA 636
Query 4781 AGC-----GTT-----------AAATA-ATTT----ACTT--TTTTCAAATGGGTCTTGA 4817
||| || ||| | || | |||| ||||||| | |||
Sbjct 635 AGCAAAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTG 576
Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877
|| ||||| || || || || |||||||||||||||||||| || ||||| || ||
Sbjct 575 ATGTAAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGT 516
Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAG 4937
| || ||||| || | | |||||| | |||||||| | | ||| | || | ||||
Sbjct 515 ATGCCATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTCGA-TAAG 457
Query 4938 -TTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996
||||| ||||| || ||||| || || ||||| || | ||| | ||||| ||||
Sbjct 456 ATTTTCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCG 397
Query 4997 CTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTC 5056
| || | ||||||||| ||||| || || || ||||||| ||||||||||| ||
Sbjct 396 TCGCTCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTC 337
Query 5057 AACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAAT 5116
|| ||||| || || || | ||||| || || | |||||| |||||||||| |||
Sbjct 336 TACTGTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAAT 277
Query 5117 CGGAAGTATGACAAA 5131
|||| || |||||
Sbjct 276 GGGAAACATTACAAA 262
>seq75644
Length=2520
Score = 194 bits (214), Expect = 1e-44
Identities = 589/910 (65%), Gaps = 39/910 (4%)
Strand=Plus/Plus
Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315
|||||||||||| || ||||| || ||||| || |||||||| || | ||| |||||
Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642
Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAG 4375
|||||||||||||| ||||| || || || || || | || | ||
Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTATAG 702
Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435
||| || || || |||||||| | || ||| ||| | || ||||| || ||||| |
Sbjct 703 CAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAG 762
Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495
| | || |||| || | | || || | | |||||| | || || ||| |||
Sbjct 763 TTTTACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAATAT 822
Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555
| | | | || ||| || || || || | | | |||| | || |||||
Sbjct 823 AGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGCAAA 882
Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615
|| || | |||||||| | ||||| ||||| || || || || || |||||
Sbjct 883 GTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCAT 942
Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675
| || | ||| |||||||||||||||| ||||| || |||||||| | |||||
Sbjct 943 CAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCTTC 1002
Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT--AATCCAT 4733
| || ||||| ||| | | || | |||| || |||||| | ||||||
Sbjct 1003 GATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGT--TGACTTTGTATCACCAATCCAG 1060
Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCA--CG-GAATTGTGTATATAGCGTTAAAT 4790
| | ||||| | || ||||| | || || || | ||||| || || |||||
Sbjct 1061 TCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTTGTG---ATGGCATTAAAC 1117
Query 4791 AA----------------------TT-----TACTT--TTTTCAAATGGGTCTTGAATAT 4821
|| || ||| | ||||| | ||| ||| | ||||
Sbjct 1118 AAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATAT 1177
Query 4822 AAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATC 4881
| || || || || || | |||||| || || || ||||||||||| || ||||| | |
Sbjct 1178 ATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGC 1237
Query 4882 CGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTT 4941
|||||||||||| | || | |||||||||||| | || ||| | ||| || | ||||
Sbjct 1238 CGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTT 1297
Query 4942 CGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTT 5001
| || || || |||||||| || || || || | ||| | |||||||| | | |
Sbjct 1298 CCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCT 1357
Query 5002 CGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAG 5061
| | ||||||||| | ||| || | ||||| | |||||||| |||||||| |
Sbjct 1358 CTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACTG 1417
Query 5062 TCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAA 5121
||| || || || | || |||||||| | ||| ||||| ||||| || || || |
Sbjct 1418 ACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGCA 1477
Query 5122 GTATGACAAA 5131
||| |||||
Sbjct 1478 ATATCACAAA 1487
>seq110960
Length=1818
Score = 190 bits (210), Expect = 2e-43
Identities = 591/912 (65%), Gaps = 42/912 (5%)
Strand=Plus/Minus
Query 4256 TTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATT 4315
|||||||||||| || ||||| || ||||| || |||||||| || | ||| |||||
Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177
Query 4316 TTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGC-TACAA 4374
|||||||||||||| ||||| || || || || || | || | ||||
Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTACA- 1118
Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434
|||| || || || |||||||| | || ||| ||| | || ||||| || ||||| |
Sbjct 1117 GCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATCA 1058
Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494
| | || |||| || | | || || | | |||||| | || || ||| ||
Sbjct 1057 GTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAATA 998
Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554
|| | | | || ||| || || || || | | | |||| | || ||||
Sbjct 997 TAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGCAA 938
Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614
| || || | |||||||| | ||||| ||||| || || || || || ||||
Sbjct 937 AGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCA 878
Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674
| | || | ||| |||||||||||||||| ||||| || |||||||| | ||||
Sbjct 877 TCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCTT 818
Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT--AATCCA 4732
| | || ||||| ||| | | || | |||| || |||||| | ||||||
Sbjct 817 CGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGT--TGACTTTGTATCACCAATCCA 760
Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCA--CGGAATT-GTGTATATAGCGTTAAA 4789
| | ||||| | || ||||| | || || || || ||| || || |||||
Sbjct 759 GTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTCGTG---ATGGCATTAAA 703
Query 4790 TAA-----------------------TT-----TACTT--TTTTCAAATGGGTCTTGAAT 4819
|| || ||| | ||||| | ||| ||| | ||
Sbjct 702 CAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGAT 643
Query 4820 ATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAA 4879
||| || || || || || | |||||| || ||||| ||||||||||| || ||||| |
Sbjct 642 ATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCAT 583
Query 4880 TCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTT 4939
||||||||||||| | || | |||||||||||| | || ||| | ||| || | ||
Sbjct 582 GCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATT 523
Query 4940 TTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTG 4999
||| || || || |||||||| || || || || | ||| | |||||||| | |
Sbjct 522 TTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCG 463
Query 5000 TTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAAC 5059
|| | ||||||||| | ||| || | ||||| | |||||||| ||||||||
Sbjct 462 CTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAAC 403
Query 5060 AGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGG 5119
| ||| || || || | || |||||||| | ||| ||||| ||||| || || ||
Sbjct 402 TGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGG 343
Query 5120 AAGTATGACAAA 5131
| ||| || ||
Sbjct 342 CAATATCACGAA 331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425402853770534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |