Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq150668 203 4e-47 seq75644 194 2e-44 seq110960 183 4e-41 seq93010 170 3e-37 >seq150668 Length=1318 Score = 203 bits (224), Expect = 4e-47 Identities = 603/921 (65%), Gaps = 47/921 (5%) Strand=Plus/Minus Query 47853 TGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 47912 || ||||| || || || |||||||||||||| |||||||| |||| |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 47913 ATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 47972 ||||||||||| ||||| | | || |||| || || | || | ||| || | || Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 47973 CTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTA 48032 | ||| || || || ||||| || | ||| | | |||||||| || || || | Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 48033 ACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCG-A 48091 || || | ||| || || ||||| ||||| || || | || || ||| | ||||| | | Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 48092 TGTTACCGTTTCCTCACTT--GGTGGATACAA-CAAATGTTTAAACATTAAACATGCAAA 48148 || || || || ||| ||| | ||| | ||| ||||| | | || || || Sbjct 923 TGGATCC---TCTTCTCTTCCGGT-TTTGCAATGATATGCTTAAATAGGAGGCAAGCGAA 868 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 ||| ||||| || || ||||||| ||| || | || || || ||||| |||||||| Sbjct 867 ATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCAT 808 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT-CCAGAAAAGAATATGCCTT 48267 || ||||| ||||| ||||||||||| || || |||| | || || ||||| | |||| Sbjct 807 AAGACCACGCTTTTTAAGCCAAAATATCGCGGC-AAAGCTGCCTGAGAAGAAAACACCTT 749 Query 48268 CTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCA---CC 48324 |||| || ||||| || | | | | || | | ||| |||| | |||| | Sbjct 748 CTACAGCTGCAAAAGC--TGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCCA 691 Query 48325 GT--TGTGCCCAATCAGCCTTCTTCTTTAC-----ACAAG---------GCATT------ 48362 || | ||||| | ||||| || | || |||| ||||| Sbjct 690 GTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAA 631 Query 48363 ---GTTTCTATAGCATTAAAGAGA------AAGtt-tttttCATTGCTATCTTTAACGTA 48412 || ||| | | ||||| | || || |||||| |||| | | ||| Sbjct 630 AAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGTA 571 Query 48413 AGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCC 48472 |||||| || | |||| |||||||| || || ||||| ||||| || || || | || Sbjct 570 AGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGCC 511 Query 48473 GTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTC 48532 |||||||| | |||||| |||||| || || | ||| || || | ||| || Sbjct 510 ATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTCGATAAGATTTTC 451 Query 48533 ATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTC 48592 ||||| |||||||||||||| |||||||| | || | | ||| | || Sbjct 450 CAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCTC 391 Query 48593 GTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGT 48652 | | ||| |||||| | | | ||||| || | ||| ||||| || |||| Sbjct 390 TCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTGT 331 Query 48653 CCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAA 48712 ||| || || ||| | ||||| ||||| | ||||| || ||| || | || || || Sbjct 330 CCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAAA 271 Query 48713 AATAACAAATCTATTTGGATT 48733 || ||||| | ||||||| Sbjct 270 CATTACAAAGCGCCTTGGATT 250 >seq75644 Length=2520 Score = 194 bits (214), Expect = 2e-44 Identities = 602/930 (65%), Gaps = 44/930 (5%) Strand=Plus/Plus Query 47830 CTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTT 47889 || ||||||||| | |||||| ||||| || ||||| ||||| || || || |||| Sbjct 564 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTT 623 Query 47890 TGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttt 47949 |||| || | || ||||| |||||||||||||| ||||| | ||||| |||| || | Sbjct 624 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 683 Query 47950 tAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTT 48009 | || | || | | || | ||| ||||| ||||| | || | |||||| | Sbjct 684 CGTAACCAAGCTCGTATAGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATAT 743 Query 48010 CACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATA 48068 |||| ||||| || || ||||| || |||| ||||| | |||||| ||| ||| || Sbjct 744 CACAGTTCATGCCAATCAGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 802 Query 48069 GTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGT 48128 | || ||| | ||| | || ||||| | || | || | |||| Sbjct 803 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 862 Query 48129 TTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTA 48188 || |||| | || ||||| || ||||| ||||| || | |||||| | ||| || Sbjct 863 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 922 Query 48189 GAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT 48248 || || | || ||||| || ||||| || || ||||||||||| | ||| ||| Sbjct 923 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 982 Query 48249 CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAAC--TGG 48306 || |||||||| | ||||| | || ||||| || | || | ||| | ||| || Sbjct 983 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGC-AAACGTTGA 1041 Query 48307 CTTCGTTGTGT-----ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA----- 48356 || |||| | ||||| | ||||| | ||||| || | ||||||| Sbjct 1042 CT---TTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAG 1098 Query 48357 ---------GGCATT---------GTTTCTA-------TAGCATTAAAGAGAAAGttttt 48391 |||||| | |||| ||| ||||| | | | ||| Sbjct 1099 GTTTGTGATGGCATTAAACAAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTT 1158 Query 48392 ttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATT 48451 | || || |||| | || ||||| || | ||||| |||||| || ||||||||||| Sbjct 1159 TCCACTG-GATCTCGGATATATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATT 1217 Query 48452 TTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACA 48511 ||| ||||||||||| | |||||||| |||| | || | | || || || || Sbjct 1218 TTCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACT 1277 Query 48512 AAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATAC 48571 ||| ||||| ||| ||| || || ||||||||||| ||||| || || || | || Sbjct 1278 AAACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAAC 1337 Query 48572 ATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGA 48631 | ||||||| | || | | ||| || ||| | || ||||| || Sbjct 1338 GTACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGA 1397 Query 48632 TATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 | ||| || |||||| ||| ||| ||||| || | || ||||| || | | ||| || Sbjct 1398 CAAATCAACCTCTTCAACTGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGAT 1457 Query 48692 ATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||| ||||||||||| || || ||||| Sbjct 1458 ATCCGGATATTGGATTGGCAATATCACAAA 1487 >seq110960 Length=1818 Score = 183 bits (202), Expect = 4e-41 Identities = 600/931 (64%), Gaps = 45/931 (5%) Strand=Plus/Minus Query 47830 CTTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTT 47889 || ||||||||| | |||||| ||||| || ||||| ||||| || || || |||| Sbjct 1255 CTCGAGACATAATGTTCGCTTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTT 1196 Query 47890 TGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttt 47949 |||| || | || ||||| |||||||||||||| ||||| | ||||| |||| || | Sbjct 1195 TGCCCTCGATCGAGATATTCTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCT 1136 Query 47950 tAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTT 48009 | || | || | | || | ||| ||||| ||||| | || | |||||| | Sbjct 1135 CGTAACCAAGCTCGTACAGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATAT 1076 Query 48010 CACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT-AAGAAACTCTTGTTCGATA 48068 |||| ||||| || || ||||| || |||| ||||| | |||||| ||| ||| || Sbjct 1075 CACAGTTCATGCCAATCAGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATC 1017 Query 48069 GTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGT 48128 | || ||| | ||| | || ||||| | || | || | |||| Sbjct 1016 TCCAATGCCTCCTTGAATATAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGT 957 Query 48129 TTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTA 48188 || |||| | || ||||| || ||||| ||||| || | |||||| | ||| || Sbjct 956 TTGAACAGAAGGCAAGCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTG 897 Query 48189 GAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGAT 48248 || || | || ||||| || ||||| || || ||||||||||| | ||| ||| Sbjct 896 CTGAAGGTCAAGCCTGGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTG 837 Query 48249 CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAAC--TGG 48306 || |||||||| | ||||| | || ||||| || | || | ||| | ||| || Sbjct 836 CCGGAAAAGAAGACTCCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGC-AAACGTTGA 778 Query 48307 CTTCGTTGTGT-----ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAA----- 48356 || |||| | ||||| | ||||| | ||||| || | ||||||| Sbjct 777 CT---TTGTATCACCAATCCAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAG 721 Query 48357 ---------GGCATT---------GTTTCTA--------TAGCATTAAAGAGAAAGtttt 48390 |||||| | |||| ||| ||||| | | | || Sbjct 720 GTTCGTGATGGCATTAAACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTT 661 Query 48391 tttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATAT 48450 || || || |||| | || ||||| || | ||||| |||||| || || ||||||| Sbjct 660 TTCCACTG-GATCTCGGATATACGTATCAATCAGAAGACAATACATCTCCGAATGAATAT 602 Query 48451 TTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTAC 48510 |||| ||||||||||| | |||||||| |||| | || | | || || || || Sbjct 601 TTTCTATTGCCATCTGCATGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGAC 542 Query 48511 AAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATA 48570 ||| ||||| ||| ||| || || ||||||||||| ||||| || || || | | Sbjct 541 TAAACCGTTCCACCAGATTTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAA 482 Query 48571 CATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTG 48630 | | ||||||| | || | | ||| || ||| | || ||||| | Sbjct 481 CGTACGATATAAAATGTCGCTCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGG 422 Query 48631 ATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATA 48690 | | ||| || |||||| ||| ||| ||||| || | || ||||| || | | ||| | Sbjct 421 ACAAATCAACCTCTTCAACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGA 362 Query 48691 TATCACTGTATTGGATTGGGAAAATAACAAA 48721 |||| ||||||||||| || || || || Sbjct 361 TATCCGGATATTGGATTGGCAATATCACGAA 331 >seq93010 Length=2134 Score = 170 bits (188), Expect = 3e-37 Identities = 453/686 (66%), Gaps = 6/686 (1%) Strand=Plus/Minus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||||| ||| ||||| | |||| | ||||| ||||| | || ||| | | Sbjct 824 TCAAATTGATCACCCCACAAATCAGAAAGGCCAGGACATTCGTGCGGATCCATAAGACTC 765 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||||| |||| ||| ||| || |||||| ||||| || ||||| || ||| ||| Sbjct 764 CAGTCGCCATTAGCCTCAACACGGCGCATAAACAGATCGGGGATCCAAAGGGCATAAAAA 705 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 ||||| | | | | ||||| || || ||||| | || | || | | Sbjct 704 AGATCCCTAGCACGAACCTCTTCTGCACCAGTGTTCTTGCGTAATTCTACGAAGGAGAGA 645 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 || || | ||||||||| || ||||| || || | | ||||| | | ||||| ||| Sbjct 644 ATGTCCGTATGCCATGGCTCGAGATAGATGGCAAAGGCACCAGGCCTCCTGTTACCACCC 585 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| | || | || || || ||| |||| | |||||||| | || || || || Sbjct 584 TGATCGACGTAGCGAGCAGTATTGTTAAAAACACGTAACATTGGCACAAGTCCATTGGAG 525 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 ||||| || |||| |||||| | ||| | |||| || | || || || Sbjct 524 TAACCATTCGTACCAGCAATATAGGTACCAGTGCCGCGTATGCAATGAACATTTACACCA 465 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 || || || || | ||||| || || || || | | |||||| || || ||||| Sbjct 464 ATACCCCCAGCACTTTTAGAAATAAGGGCACATTGCCGGAGTGTATCATAAATGCCCTCA 405 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 || ||||||||| |||| | | |||||||||||| ||||| || | || || Sbjct 404 ATGCTGTCATCCTTCATTGTGACAAGAAAACAGCTGGACATCTGGGGCCTTGGTGTACCA 345 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTT 78464 | |||||| | || || || || || |||||||| || || | | ||||| ||| Sbjct 344 GAATTAAAGAGAGTGGGGGAAGCGTGAGTAAACCACTTCAAGGACATCAAGTTGTAGGTT 285 Query 78465 TCAATAGCTGATTCTATGTCC-CATTGATGAATTCCTACCGCTACACGCATCAACATATG 78523 ||| ||| |||||||| || | ||||| || | | || | ||||| |||||| Sbjct 284 TCACAGACTGCCTCTATGTCATCAAAG-TGAATACCAATTGAGACTCTCATCAGCATATG 226 Query 78524 CTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTT 78582 |||||| | |||| ||||||| ||||| || ||| ||||| | ||||| || | Sbjct 225 CTGAGGACGTTCATGAACTTTATTATCGATTTT-AAGAAGATATGAGTGCTCCAATGTCT 167 Query 78583 TAAAACCAAAATAGTTGTA--TGAAA 78606 |||| ||||| || ||||| ||||| Sbjct 166 TAAAGCCAAAGTAATTGTAGTTGAAA 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691921402262720