Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq150668 244 2e-59
seq75644 221 2e-52
seq93010 215 7e-51
seq110960 212 9e-50
>seq150668
Length=1318
Score = 244 bits (270), Expect = 2e-59
Identities = 614/924 (66%), Gaps = 53/924 (6%)
Strand=Plus/Minus
Query 46342 TGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 46401
|||||||| || || || |||||||||||||| |||||||| |||| ||||||||||||
Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104
Query 46402 ATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 46461
||||||||||||||||| || |||| || || | || | ||| || | ||
Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044
Query 46462 CTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTG 46521
| ||| || || || ||||| || ||| | | |||||||| || ||||| ||
Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984
Query 46522 ACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGA- 46580
|| || | ||| || || ||||| ||||| ||||| | || || ||| ||||| ||
Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924
Query 46581 -TGTTACTGTT-TCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638
| | || || || || | || | || | ||| ||||| | | || || |||
Sbjct 923 TGGATCCTCTTCTCTTCCGGTTTTGCA---ATGATATGCTTAAATAGGAGGCAAGCGAAA 867
Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698
|| ||||| || || ||||||| ||| || | || || || ||||| || |||||
Sbjct 866 TCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCATA 807
Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT-CCAGAAAAGAATATGCCTTC 46757
|| ||||||||||| ||||||||||| || || |||| | || || ||||| | |||||
Sbjct 806 AGACCACGCTTTTTAAGCCAAAATATCGCGGC-AAAGCTGCCTGAGAAGAAAACACCTTC 748
Query 46758 TACAGCCGCGAA---TGCGACAAGTCTCTCTCCGTAACTG--GCATCATTAT---GAATC 46809
|||||| || || ||||||| || || | | || | || ||| ||||
Sbjct 747 TACAGCTGCAAAAGCTGCGACACGT-----TCAGAGAATGGAGAATTTGTATCTCCAATC 693
Query 46810 CACCTTTGAGCCCAATCAGCCTTTTTCTTTAC-----ACAAG---------GCATT---- 46851
|| ||||||| | |||||||| | || |||| |||||
Sbjct 692 CAGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGC 633
Query 46852 -----GTTTCTATAGCATTAAAGAGA------AAGtt-tttttCATCACTATCTTTAACA 46899
|| ||| | | ||||| | || || |||||| || |||| | |
Sbjct 632 AAAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATG 573
Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959
|| ||||| || | |||| |||||||| ||||| || || |||||||| || || |
Sbjct 572 TAAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATG 513
Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATT 47018
|| |||||||| | |||| | ||||| || ||| | ||| || || || || |||
Sbjct 512 CCATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATT 454
Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTT 47078
|| ||||| |||||||||||||| |||||||| | || | | ||| |
Sbjct 453 TTCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCG 394
Query 47079 TTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGC 47138
|| | | | ||| |||||| | | | ||||| || | ||| ||||| || |
Sbjct 393 CTCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTAC 334
Query 47139 TGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGG 47198
||||||||| || ||| | ||||| ||||| | ||||| || ||| |||| | || ||
Sbjct 333 TGTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGG 274
Query 47199 AAAAATAACAAATCTATTTGGATT 47222
||| || ||||| | |||||||
Sbjct 273 AAACATTACAAAGCGCCTTGGATT 250
>seq75644
Length=2520
Score = 221 bits (244), Expect = 2e-52
Identities = 598/908 (66%), Gaps = 38/908 (4%)
Strand=Plus/Plus
Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397
|||||||||||| || ||||| ||||| || || || |||||||| || | || |||||
Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642
Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAAT 46457
|||||||||||||| ||||| | |||| |||| || | | || | || | |
Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTATAG 702
Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517
|| | ||| ||||| ||||| | || |||||| ||||| ||||| || || ||
Sbjct 703 CAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAG 762
Query 46518 TTTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576
||| || |||| ||||| | |||||| ||| ||| || | || ||| | ||
Sbjct 763 TTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGAATA 821
Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636
| | || ||||| | || | || | |||||| |||| | || ||||
Sbjct 822 TAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGCAA 881
Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696
| || ||||||||||| || | |||||| | ||| || || || | || ||||
Sbjct 882 AGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCA 941
Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756
| || |||||||| || ||||||||||||| ||| ||| || |||||||| | ||||
Sbjct 942 TCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCTT 1001
Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAAC--TGGCAT--CATTATGAATCCAC 46812
| | || || || || ||| | ||| | ||| || | | || | ||||||
Sbjct 1002 CGATTGCAGCAAAGGCTGCAATACGCTCGGC-AAACGTTGACTTTGTATCACCAATCCAG 1060
Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT-ATAGCATTAAA--- 46868
| ||||| | |||||||| | ||||||| | |||| | || ||||||||
Sbjct 1061 TCAAGGGCCCACTGCGCCTTTTTGTGTACACAA-TCGAGGTTTGTGATGGCATTAAACAA 1119
Query 46869 ---------GAGAAAGtt---ttt-----ttCAT-------CACT--ATCTTTAACATAT 46902
||||| || ||| | ||| |||| |||| | ||||
Sbjct 1120 GAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATATAT 1179
Query 46903 GTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCG 46962
||||| || | ||||| |||||| || || ||||| ||||| || |||||||| | |||
Sbjct 1180 GTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGCCG 1239
Query 46963 TAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCA 47022
||||| |||| | || | | || || ||| || ||| ||||| || ||| ||
Sbjct 1240 TAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTTCC 1299
Query 47023 TTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCA 47082
||| ||||||||||| ||||| || || || | || | ||||||| | ||
Sbjct 1300 AGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCTCT 1359
Query 47083 TCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTC 47142
| | | ||| || ||| | || ||||| || | ||| || |||||| ||| |
Sbjct 1360 CCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACTGAC 1419
Query 47143 CAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAA 47202
|||||||| || | || ||||| || | | ||| ||||| |||||||||| || ||
Sbjct 1420 CAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGCAAT 1479
Query 47203 ATAACAAA 47210
|| |||||
Sbjct 1480 ATCACAAA 1487
>seq93010
Length=2134
Score = 215 bits (238), Expect = 7e-51
Identities = 463/686 (67%), Gaps = 6/686 (1%)
Strand=Plus/Minus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
||||||| ||| ||||| | |||| | ||||||||||| | |||| ||| | |
Sbjct 824 TCAAATTGATCACCCCACAAATCAGAAAGGCCAGGACATTCGTGCGGATCCATAAGACTC 765
Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639
|| || |||| ||| ||| || |||||| ||||| || ||||| || ||| |||
Sbjct 764 CAGTCGCCATTAGCCTCAACACGGCGCATAAACAGATCGGGGATCCAAAGGGCATAAAAA 705
Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699
||||| | | | | ||||| || || ||||| | |||| ||| | |
Sbjct 704 AGATCCCTAGCACGAACCTCTTCTGCACCAGTGTTCTTGCGTAATTCTACGAAGGAGAGA 645
Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759
|| || | ||||||||| || ||||| || || | |||| || | | ||||| |||
Sbjct 644 ATGTCCGTATGCCATGGCTCGAGATAGATGGCAAAGGCACCAGGCCTCCTGTTACCACCC 585
Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819
||||| | || | ||||| || ||| |||| | |||||||| | || || || ||
Sbjct 584 TGATCGACGTAGCGAGCAGTATTGTTAAAAACACGTAACATTGGCACAAGTCCATTGGAG 525
Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879
|||||| || |||| |||||| | ||| | || || | || | || ||
Sbjct 524 TAACCATTCGTACCAGCAATATAGGTACCAGTGCCGCGTATGCAATGAACATTTACACCA 465
Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939
|| || || || ||||||| || || ||||| | | ||| ||||| ||||||||
Sbjct 464 ATACCCCCAGCACTTTTAGAAATAAGGGCACATTGCCGGAGTGTATCATAAATGCCCTCA 405
Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999
|| || |||||| |||| | | |||||||||||| ||||| || | || ||
Sbjct 404 ATGCTGTCATCCTTCATTGTGACAAGAAAACAGCTGGACATCTGGGGCCTTGGTGTACCA 345
Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059
| |||||| | || || || || ||||| ||||| || || | | ||||| |||
Sbjct 344 GAATTAAAGAGAGTGGGGGAAGCGTGAGTAAACCACTTCAAGGACATCAAGTTGTAGGTT 285
Query 77060 TCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118
||| ||||| ||||| || || | ||||| || | | ||| | ||||| ||||||
Sbjct 284 TCACAGACTGCCTCTATGTCATCAAAG-TGAATACCAATTGAGACTCTCATCAGCATATG 226
Query 77119 CTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTT 77177
|||||| ||||| | ||||||| ||||| || ||| ||||| | ||||| || |
Sbjct 225 CTGAGGACGTTCATGAACTTTATTATCGATTTT-AAGAAGATATGAGTGCTCCAATGTCT 167
Query 77178 TAAAACCAAAATAGTTGTA--TGAAA 77201
|||| ||||| || ||||| |||||
Sbjct 166 TAAAGCCAAAGTAATTGTAGTTGAAA 141
>seq110960
Length=1818
Score = 212 bits (234), Expect = 9e-50
Identities = 596/911 (65%), Gaps = 43/911 (5%)
Strand=Plus/Minus
Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397
|||||||||||| || ||||| ||||| || || || |||||||| || | || |||||
Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177
Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAAT 46457
|||||||||||||| ||||| | |||| |||| || | | || | || | |
Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTACAG 1117
Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517
|| | ||| ||||| ||||| | || |||||| ||||| ||||| || || ||
Sbjct 1116 CAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATCAG 1057
Query 46518 TTTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576
|||||| |||| ||||| | |||||| ||| ||| || | || ||| | ||
Sbjct 1056 TTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGAATA 998
Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636
| | || ||||| | || | || | |||||| |||| | || ||||
Sbjct 997 TAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGCAA 938
Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696
| || ||||||||||| || | |||||| | ||| || || || | || ||||
Sbjct 937 AGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCA 878
Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756
| || |||||||| || ||||||||||||| ||| ||| || |||||||| | ||||
Sbjct 877 TCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCTT 818
Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAAC--TGGCAT--CATTATGAATCCAC 46812
| | || || || || ||| | ||| | ||| || | | || | ||||||
Sbjct 817 CGATTGCAGCAAAGGCTGCAATACGCTCGGC-AAACGTTGACTTTGTATCACCAATCCAG 759
Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAA--------------GGCATT------- 46851
| ||||| | |||||||| | ||||||| ||||||
Sbjct 758 TCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTCGTGATGGCATTAAACAAG 699
Query 46852 --GTTTCTA--------TAGCATTAAAGAGAAAGtttttttCATCACT--ATCTTTAACA 46899
| |||| ||| ||||| | | | | ||||| |||| |||| | |
Sbjct 698 AAATCTCTAAGAAAACTTAGATTTAAAAATACA-TACTTTTC--CACTGGATCTCGGATA 642
Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959
|| ||||| || | ||||| |||||| || |||||||| ||||| || |||||||| |
Sbjct 641 TACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCATG 582
Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTC 47019
|||||||| |||| | || | | || || ||| || ||| ||||| || |||
Sbjct 581 CCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTT 522
Query 47020 TCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTT 47079
|| ||| ||||||||||| ||||| || || || | || | ||||||| |
Sbjct 521 TCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGC 462
Query 47080 TCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCT 47139
|| | | | ||| || ||| | || ||||| || | ||| || |||||| ||
Sbjct 461 TCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACT 402
Query 47140 GTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGA 47199
| ||||||||| || | || ||||| || | | ||| ||||| |||||||||| ||
Sbjct 401 GACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGC 342
Query 47200 AAAATAACAAA 47210
|| || || ||
Sbjct 341 AATATCACGAA 331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 710114762271360
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