Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq150668 244 2e-59 seq75644 221 2e-52 seq93010 215 7e-51 seq110960 212 9e-50 >seq150668 Length=1318 Score = 244 bits (270), Expect = 2e-59 Identities = 614/924 (66%), Gaps = 53/924 (6%) Strand=Plus/Minus Query 46342 TGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCC 46401 |||||||| || || || |||||||||||||| |||||||| |||| |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 46402 ATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGT 46461 ||||||||||||||||| || |||| || || | || | ||| || | || Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAATCTTCTTGTAACCAAGTTCAGACAGAAGA 1044 Query 46462 CTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTG 46521 | ||| || || || ||||| || ||| | | |||||||| || ||||| || Sbjct 1043 CGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGACTG 984 Query 46522 ACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGA- 46580 || || | ||| || || ||||| ||||| ||||| | || || ||| ||||| || Sbjct 983 ACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTATAGAA 924 Query 46581 -TGTTACTGTT-TCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAA 46638 | | || || || || | || | || | ||| ||||| | | || || ||| Sbjct 923 TGGATCCTCTTCTCTTCCGGTTTTGCA---ATGATATGCTTAAATAGGAGGCAAGCGAAA 867 Query 46639 TCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATT 46698 || ||||| || || ||||||| ||| || | || || || ||||| || ||||| Sbjct 866 TCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGCATA 807 Query 46699 AGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGAT-CCAGAAAAGAATATGCCTTC 46757 || ||||||||||| ||||||||||| || || |||| | || || ||||| | ||||| Sbjct 806 AGACCACGCTTTTTAAGCCAAAATATCGCGGC-AAAGCTGCCTGAGAAGAAAACACCTTC 748 Query 46758 TACAGCCGCGAA---TGCGACAAGTCTCTCTCCGTAACTG--GCATCATTAT---GAATC 46809 |||||| || || ||||||| || || | | || | || ||| |||| Sbjct 747 TACAGCTGCAAAAGCTGCGACACGT-----TCAGAGAATGGAGAATTTGTATCTCCAATC 693 Query 46810 CACCTTTGAGCCCAATCAGCCTTTTTCTTTAC-----ACAAG---------GCATT---- 46851 || ||||||| | |||||||| | || |||| ||||| Sbjct 692 CAGTCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGC 633 Query 46852 -----GTTTCTATAGCATTAAAGAGA------AAGtt-tttttCATCACTATCTTTAACA 46899 || ||| | | ||||| | || || |||||| || |||| | | Sbjct 632 AAAAAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATG 573 Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959 || ||||| || | |||| |||||||| ||||| || || |||||||| || || | Sbjct 572 TAAGTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATG 513 Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATT 47018 || |||||||| | |||| | ||||| || ||| | ||| || || || || ||| Sbjct 512 CCATAAAAACAGCGAACTTCTGGGATCTGAACTTCTTGGCTAAACCGCTC-GATAAGATT 454 Query 47019 CTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTT 47078 || ||||| |||||||||||||| |||||||| | || | | ||| | Sbjct 453 TTCCAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCG 394 Query 47079 TTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGC 47138 || | | | ||| |||||| | | | ||||| || | ||| ||||| || | Sbjct 393 CTCTCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTAC 334 Query 47139 TGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGG 47198 ||||||||| || ||| | ||||| ||||| | ||||| || ||| |||| | || || Sbjct 333 TGTCCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGG 274 Query 47199 AAAAATAACAAATCTATTTGGATT 47222 ||| || ||||| | ||||||| Sbjct 273 AAACATTACAAAGCGCCTTGGATT 250 >seq75644 Length=2520 Score = 221 bits (244), Expect = 2e-52 Identities = 598/908 (66%), Gaps = 38/908 (4%) Strand=Plus/Plus Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397 |||||||||||| || ||||| ||||| || || || |||||||| || | || ||||| Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642 Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAAT 46457 |||||||||||||| ||||| | |||| |||| || | | || | || | | Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTATAG 702 Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517 || | ||| ||||| ||||| | || |||||| ||||| ||||| || || || Sbjct 703 CAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATCAG 762 Query 46518 TTTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576 ||| || |||| ||||| | |||||| ||| ||| || | || ||| | || Sbjct 763 TTTTACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGAATA 821 Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 | | || ||||| | || | || | |||||| |||| | || |||| Sbjct 822 TAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGCAA 881 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 | || ||||||||||| || | |||||| | ||| || || || | || |||| Sbjct 882 AGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCA 941 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | || |||||||| || ||||||||||||| ||| ||| || |||||||| | |||| Sbjct 942 TCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCTT 1001 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAAC--TGGCAT--CATTATGAATCCAC 46812 | | || || || || ||| | ||| | ||| || | | || | |||||| Sbjct 1002 CGATTGCAGCAAAGGCTGCAATACGCTCGGC-AAACGTTGACTTTGTATCACCAATCCAG 1060 Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT-ATAGCATTAAA--- 46868 | ||||| | |||||||| | ||||||| | |||| | || |||||||| Sbjct 1061 TCAAGGGCCCACTGCGCCTTTTTGTGTACACAA-TCGAGGTTTGTGATGGCATTAAACAA 1119 Query 46869 ---------GAGAAAGtt---ttt-----ttCAT-------CACT--ATCTTTAACATAT 46902 ||||| || ||| | ||| |||| |||| | |||| Sbjct 1120 GAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATATAT 1179 Query 46903 GTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCG 46962 ||||| || | ||||| |||||| || || ||||| ||||| || |||||||| | ||| Sbjct 1180 GTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGCCG 1239 Query 46963 TAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCA 47022 ||||| |||| | || | | || || ||| || ||| ||||| || ||| || Sbjct 1240 TAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTTCC 1299 Query 47023 TTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCA 47082 ||| ||||||||||| ||||| || || || | || | ||||||| | || Sbjct 1300 AGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCTCT 1359 Query 47083 TCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTC 47142 | | | ||| || ||| | || ||||| || | ||| || |||||| ||| | Sbjct 1360 CCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACTGAC 1419 Query 47143 CAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAA 47202 |||||||| || | || ||||| || | | ||| ||||| |||||||||| || || Sbjct 1420 CAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGCAAT 1479 Query 47203 ATAACAAA 47210 || ||||| Sbjct 1480 ATCACAAA 1487 >seq93010 Length=2134 Score = 215 bits (238), Expect = 7e-51 Identities = 463/686 (67%), Gaps = 6/686 (1%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||||| ||| ||||| | |||| | ||||||||||| | |||| ||| | | Sbjct 824 TCAAATTGATCACCCCACAAATCAGAAAGGCCAGGACATTCGTGCGGATCCATAAGACTC 765 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || |||| ||| ||| || |||||| ||||| || ||||| || ||| ||| Sbjct 764 CAGTCGCCATTAGCCTCAACACGGCGCATAAACAGATCGGGGATCCAAAGGGCATAAAAA 705 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| | | | | ||||| || || ||||| | |||| ||| | | Sbjct 704 AGATCCCTAGCACGAACCTCTTCTGCACCAGTGTTCTTGCGTAATTCTACGAAGGAGAGA 645 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 || || | ||||||||| || ||||| || || | |||| || | | ||||| ||| Sbjct 644 ATGTCCGTATGCCATGGCTCGAGATAGATGGCAAAGGCACCAGGCCTCCTGTTACCACCC 585 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 ||||| | || | ||||| || ||| |||| | |||||||| | || || || || Sbjct 584 TGATCGACGTAGCGAGCAGTATTGTTAAAAACACGTAACATTGGCACAAGTCCATTGGAG 525 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 |||||| || |||| |||||| | ||| | || || | || | || || Sbjct 524 TAACCATTCGTACCAGCAATATAGGTACCAGTGCCGCGTATGCAATGAACATTTACACCA 465 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || ||||||| || || ||||| | | ||| ||||| |||||||| Sbjct 464 ATACCCCCAGCACTTTTAGAAATAAGGGCACATTGCCGGAGTGTATCATAAATGCCCTCA 405 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 || || |||||| |||| | | |||||||||||| ||||| || | || || Sbjct 404 ATGCTGTCATCCTTCATTGTGACAAGAAAACAGCTGGACATCTGGGGCCTTGGTGTACCA 345 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 | |||||| | || || || || ||||| ||||| || || | | ||||| ||| Sbjct 344 GAATTAAAGAGAGTGGGGGAAGCGTGAGTAAACCACTTCAAGGACATCAAGTTGTAGGTT 285 Query 77060 TCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAACATATG 77118 ||| ||||| ||||| || || | ||||| || | | ||| | ||||| |||||| Sbjct 284 TCACAGACTGCCTCTATGTCATCAAAG-TGAATACCAATTGAGACTCTCATCAGCATATG 226 Query 77119 CTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAG-TATGATTTTTCCAAAGTTT 77177 |||||| ||||| | ||||||| ||||| || ||| ||||| | ||||| || | Sbjct 225 CTGAGGACGTTCATGAACTTTATTATCGATTTT-AAGAAGATATGAGTGCTCCAATGTCT 167 Query 77178 TAAAACCAAAATAGTTGTA--TGAAA 77201 |||| ||||| || ||||| ||||| Sbjct 166 TAAAGCCAAAGTAATTGTAGTTGAAA 141 >seq110960 Length=1818 Score = 212 bits (234), Expect = 9e-50 Identities = 596/911 (65%), Gaps = 43/911 (5%) Strand=Plus/Minus Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397 |||||||||||| || ||||| ||||| || || || |||||||| || | || ||||| Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177 Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAAT 46457 |||||||||||||| ||||| | |||| |||| || | | || | || | | Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAATCTTCTCGTAACCAAGCTCGTACAG 1117 Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517 || | ||| ||||| ||||| | || |||||| ||||| ||||| || || || Sbjct 1116 CAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATCAG 1057 Query 46518 TTTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTA 46576 |||||| |||| ||||| | |||||| ||| ||| || | || ||| | || Sbjct 1056 TTTGACGGGTAAGGCCTCATTAAAGAAAGCCTT-TTCTATCTCCAATGCCTCCTTGAATA 998 Query 46577 TCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 | | || ||||| | || | || | |||||| |||| | || |||| Sbjct 997 TAGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAAGCAA 938 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 | || ||||||||||| || | |||||| | ||| || || || | || |||| Sbjct 937 AGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCTGGCA 878 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | || |||||||| || ||||||||||||| ||| ||| || |||||||| | |||| Sbjct 877 TCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACTCCTT 818 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAAC--TGGCAT--CATTATGAATCCAC 46812 | | || || || || ||| | ||| | ||| || | | || | |||||| Sbjct 817 CGATTGCAGCAAAGGCTGCAATACGCTCGGC-AAACGTTGACTTTGTATCACCAATCCAG 759 Query 46813 CTTTGAGCCCAATCAGCCTTTTTCTTTACACAA--------------GGCATT------- 46851 | ||||| | |||||||| | ||||||| |||||| Sbjct 758 TCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTCGTGATGGCATTAAACAAG 699 Query 46852 --GTTTCTA--------TAGCATTAAAGAGAAAGtttttttCATCACT--ATCTTTAACA 46899 | |||| ||| ||||| | | | | ||||| |||| |||| | | Sbjct 698 AAATCTCTAAGAAAACTTAGATTTAAAAATACA-TACTTTTC--CACTGGATCTCGGATA 642 Query 46900 TATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAAT 46959 || ||||| || | ||||| |||||| || |||||||| ||||| || |||||||| | Sbjct 641 TACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCATG 582 Query 46960 CCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTC 47019 |||||||| |||| | || | | || || ||| || ||| ||||| || ||| Sbjct 581 CCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTT 522 Query 47020 TCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTT 47079 || ||| ||||||||||| ||||| || || || | || | ||||||| | Sbjct 521 TCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGC 462 Query 47080 TCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCT 47139 || | | | ||| || ||| | || ||||| || | ||| || |||||| || Sbjct 461 TCTCCTGGCTTAAGTGCATCCCATTGCACAATGTCTTTGGACAAATCAACCTCTTCAACT 402 Query 47140 GTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGA 47199 | ||||||||| || | || ||||| || | | ||| ||||| |||||||||| || Sbjct 401 GACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGGC 342 Query 47200 AAAATAACAAA 47210 || || || || Sbjct 341 AATATCACGAA 331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 710114762271360