Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq285681 201 1e-46 seq75644 187 3e-42 seq110960 174 2e-38 seq150668 156 4e-33 >seq285681 Length=594 Score = 201 bits (222), Expect = 1e-46 Identities = 207/270 (77%), Gaps = 18/270 (7%) Strand=Plus/Plus Query 8351 CTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCCCG 8410 ||||||| |||| ||| || || |||| |||| |||||||||||| || ||||| || Sbjct 3 CTGTTGCACAGGGTGGGGTACAATGGCGCCATCTTTGCTCACTGCAACTTCTGCCTCACG 62 Query 8411 GGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACA---------GGC 8461 ||| ||||| ||| |||| ||||||||||| |||||||||| |||| | | Sbjct 63 GGTCCAAGCGATTGTCCTCCCTCAGCCTCCCAGGTAGCTGGGACTACACCACACTGGGAC 122 Query 8462 AAAA------GCCACCACGCCAAGCTAATTTTT-GTATTTTTAGTAGAGAGAGGGTTTCA 8514 | | ||||||| ||| ||||||||||| | ||||||||||| || || |||||| Sbjct 123 TACACCAGCTGCCACCATGCCTAGCTAATTTTTTGGATTTTTAGTAGTGACAGCGTTTCA 182 Query 8515 CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGTGATCCACCTGCCTCGGCCTC 8574 | | ||||||||| |||||| || ||| | |||| |||||||| | ||||| |||||| Sbjct 183 CTGTATTGGCCAGGATGGTCTTGATCTCTTCACCT--TGTGATCCCCTTGCCTTGGCCTC 240 Query 8575 CCAAAGTGCTGGGATTACAGGCATGAGCCA 8604 | || |||||||||||||||| ||||||| Sbjct 241 CAAATTTGCTGGGATTACAGGCCTGAGCCA 270 >seq75644 Length=2520 Score = 187 bits (206), Expect = 3e-42 Identities = 591/912 (65%), Gaps = 43/912 (5%) Strand=Plus/Plus Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 |||||| |||||||||||||| | || || || ||||| || ||||| | || ||||| Sbjct 583 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTTGTTTTGCCCTCGATCGAGATATT 642 Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAAT--TCCTTT 23334 |||||||||||||| ||||| || ||| | | ||| | | | | || | | Sbjct 643 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAAT--CTTCTCGTAACCAAGCTCGTAT 700 Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394 | | | ||| || |||||||| | || | ||||||| |||| |||| || || || Sbjct 701 AGCAAGCGATCGGCAACAAATTCGAGGTAACGGCACATCATATCACAGTTCATGCCAATC 760 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454 |||||||| || | || |||| ||||| ||||| || | || || || | | Sbjct 761 AGTTTTACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAAT 820 Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAA---ATACTTAAACAATAAACAT 23511 || | || ||| ||| || || | ||| | || || |||| | || Sbjct 821 AT---AGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAA 877 Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 ||||| || || |||||||| || | |||||| | |||||| || || || ||| Sbjct 878 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 937 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||| | || || || |||| ||||||||| | ||||| ||||||||||| | Sbjct 938 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 997 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || | || |||||||| ||| ||| |||| |||| || |||| |||| Sbjct 998 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATC 1057 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAG 23751 || | | ||| | ||||| | |||||| || | || || || || || Sbjct 1058 CAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGAGGTTTGTGATGGCATTAAAC 1117 Query 23752 A------------GAAA---AGTTTT------------TTCTTCATT--ATCTGTTATAT 23782 | |||| || ||| || | || | |||| |||| Sbjct 1118 AAGAAATCTCTAAGAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGATAT 1177 Query 23783 ATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACC 23842 |||||||||| || | || |||||| || || ||||||||||| || || ||||| | | Sbjct 1178 ATGTATCAATCAGAAGACAATACATCTCCGAGTGAATATTTTCTATTGCCATCTGCATGC 1237 Query 23843 CATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTT 23902 | ||||| |||| | || | | |||||| || | | ||| | || | | ||||| Sbjct 1238 CGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGATTTT 1297 Query 23903 CGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTT 23962 | ||||| |||||||| ||||| |||||||| ||||| || ||||||||||| | Sbjct 1298 CCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTCGCT 1357 Query 23963 CATCAGTTGATAATTTTTTCCAAT--CATTAATATCTTTTGATAAATCAACTTCATCAAC 24020 | || ||| | ||| || || ||| ||||| || |||||||| || ||||| Sbjct 1358 C-TCCTGGCTTAAGTGCATCCCATTGCA-CAATGTCTTTGGACAAATCAACCTCTTCAAC 1415 Query 24021 TGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGG 24080 || ||| || || | || || || | | |||| ||||| || ||| ||||| Sbjct 1416 TGACCAGAATGAAGCAACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGATTGG 1475 Query 24081 AAATATTACGAA 24092 ||||| || || Sbjct 1476 CAATATCACAAA 1487 >seq110960 Length=1818 Score = 174 bits (192), Expect = 2e-38 Identities = 592/915 (65%), Gaps = 48/915 (5%) Strand=Plus/Minus Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 |||||| |||||||||||||| | || || || || || || ||||| | || ||||| Sbjct 1236 TTTTTGGTATTCCCCAACACGCTTCTCAAAGAAGTTCGTTTTGCCCTCGATCGAGATATT 1177 Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAA 23336 |||||||||||||| ||||| || ||| | | ||| | | | | | || Sbjct 1176 CTCCATAAAATCAAAGGGATTCTCAGCATTCCAAAT--CTTCTCGTAACCAAGCTCGTAC 1119 Query 23337 A--AGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394 | | | ||| || |||||||| | || | ||||||| |||| |||| || || || Sbjct 1118 AGCAAGCGATCGGCAACAAATTCGAGGTAGCGGCACATCATATCACAGTTCATGCCAATC 1059 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454 ||||| || || | || |||| ||||| ||||| || | || || || | | Sbjct 1058 AGTTTGACGGGTAAGGCCTCATTAAAGAAAGCCTTTTCTATCTCCAATGCCTCCTTGAAT 999 Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAA---ATACTTAAACAATAAACAT 23511 || | || ||| ||| || || | ||| | || || |||| | || Sbjct 998 AT---AGCATAAACACGTTCCTTATCGGGCTTTTTCACGATATGTTTGAACAGAAGGCAA 942 Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 ||||| || || |||||||| || | |||||| | |||||| || || || ||| Sbjct 941 GCAAAGTCGGTGTGAAGGCCTTCGTCGCGACTAATAAGTTCATTGCTGAAGGTCAAGCCT 882 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||| | || || || |||| ||||||||| | ||||| ||||||||||| | Sbjct 881 GGCATCAGGCCACGCTTCTTAAGCCAAAATATAGACGCAAAACTGCCGGAAAAGAAGACT 822 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || | || |||||||| ||| ||| |||| |||| || |||| |||| Sbjct 821 CCTTCGATTGCAGCAAAGGCTGCAATACGCTCGGCAAACGTTGACTTTGTATCACCAATC 762 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA--ATTGCTTTTA 23749 || | | ||| | ||||| | |||||| || | | ||| || || || | Sbjct 761 CAGTCAAGGGCCCACTGCGCCTTTTTGTGTACACAATCGA--GGTTCGTGATGGCATTAA 704 Query 23750 AGA------------GAAAAGTTT--TTT-----------CTT---CATT--ATCTGTTA 23779 | | ||||| || ||| ||| || | |||| | Sbjct 703 ACAAGAAATCTCTAAGAAAACTTAGATTTAAAAATACATACTTTTCCACTGGATCTCGGA 644 Query 23780 TATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAA 23839 |||| |||||||| || | || |||||| || |||||||||||||| || || ||||| | Sbjct 643 TATACGTATCAATCAGAAGACAATACATCTCCGAATGAATATTTTCTATTGCCATCTGCA 584 Query 23840 ACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAAT 23899 || ||||| |||| | || | | |||||| || | | ||| | || | | || Sbjct 583 TGCCGTAAAAGCATCGGACCTCGGGTACTTGAACTTCTTGACTAAACCGTTCCACCAGAT 524 Query 23900 TTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTC 23959 |||| ||||| |||||||| ||||| |||||||| ||||| || ||||||||||| Sbjct 523 TTTCCAGCACAATTCCATCACTGGCAGCGAAGAAAGCGAGAACGTACGATATAAAATGTC 464 Query 23960 TTTCATCAGTTGATAATTTTTTCCAAT--CATTAATATCTTTTGATAAATCAACTTCATC 24017 || || ||| | ||| || || ||| ||||| || |||||||| || || Sbjct 463 GCTC-TCCTGGCTTAAGTGCATCCCATTGCA-CAATGTCTTTGGACAAATCAACCTCTTC 406 Query 24018 AACTGTCCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTAT 24077 ||||| ||| || || | || || || | | |||| ||||| || ||| || Sbjct 405 AACTGACCAGAATGAAGCGACAGCCTTTTTGTAAAATTGCCAGATATCCGGATATTGGAT 346 Query 24078 TGGAAATATTACGAA 24092 ||| ||||| ||||| Sbjct 345 TGGCAATATCACGAA 331 >seq150668 Length=1318 Score = 156 bits (172), Expect = 4e-33 Identities = 582/909 (64%), Gaps = 44/909 (5%) Strand=Plus/Minus Query 23221 TGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTTCC 23280 || ||||| ||||| || | ||||||||||| || || ||||| | |||||||||||| Sbjct 1163 TGGTATTCGCCAACGCGCTTCTCGAAAAAATTGGTTTTGCCCTCCAGAGATATATTTTCC 1104 Query 23281 ATAAAATCAAATGGATTA--GAAGTATTATATACAGCTTTACATGATAATTCCTTTAAAA 23338 ||||||||||| ||||| | ||| | || | ||| | | | ||| | || Sbjct 1103 ATAAAATCAAACGGATTTTCGGAGTTCCAAAT-CTTCTTGTAACCA-AGTTCAGACAGAA 1046 Query 23339 GCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTT 23398 | | ||| || ||||| || || || ||||||| | | | | || || || || || Sbjct 1045 GACGATCAGCCACAAACTCTATGTAGCGACACATAAGAGCGCAATTCATCCCAATGAGAC 986 Query 23399 TTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTT 23458 | || || | |||||| | ||| || ||||| || || || | ||||| Sbjct 985 TGACGGGCAAAGCATCAGTGAGAAATTCTTGCTCAATTTTTACTGCCTCCTCCATTAT-- 928 Query 23459 GAACAAT--AACTTCTTCACTA--GGTGGATATTTTAAATACTTAAACAATAAACATGCA 23514 | ||| | | ||||| || ||| | | || |||||| | | || || Sbjct 927 --AGAATGGATCCTCTTCTCTTCCGGTTTTGCAATGATATGCTTAAATAGGAGGCAAGCG 870 Query 23515 AAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGC 23574 ||||| ||||| || || ||||| | ||| || | ||||| || || | || ||| Sbjct 869 AAATCGCAATGCAGTCCCTCATCTCGACTTATAAGCTCATTGCTGAAGGTGAGGCCGGGC 810 Query 23575 ATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCC 23634 || | || || ||||||| ||||||||| || ||||| || || ||||||| ||| Sbjct 809 ATAAGACCACGCTTTTTAAGCCAAAATATCGCGGCAAAGCTGCCTGAGAAGAAAACACCT 750 Query 23635 TCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAt 23694 || ||||| ||||| || | | |||| | |||| | ||| ||| |||||| Sbjct 749 TCTACAGCTGCAAAAGCTGCGACACGTTCAGAGAATGGAGAATTTGTATCTCCAATCCAG 690 Query 23695 ttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTA----- 23749 | | ||| | ||||| | | || ||||| | | | ||||| || | Sbjct 689 TCGAGAGCCCATTGCGCCTTTTTTCTGACGCACTCCAAGTTGCCGATTGCATTAAGCAAA 630 Query 23750 -AG----------AGAAAAGTT--------------TTTTCTTCATTATCTGTTATATAT 23784 || | ||||| | ||||| || |||| | || || Sbjct 629 AAGTCCCTACACAACAAAAGATATATGCCAACTTACTTTTCAACAGAATCTCTGATGTAA 570 Query 23785 GTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCA 23844 |||||||| || | | |||||||||||||| ||||| |||||||| || || | ||| Sbjct 569 GTATCAATAAGAAGAGAGTACATTTCAGAATGTATATTCTCAATAGCGATTTGTATGCCA 510 Query 23845 TAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAA-ATTTTC 23903 |||||||| | | |||| | | ||||| || || || | | | ||| |||||| Sbjct 509 TAAAAACAGCGAACTTCTGGGATCTGAACTTC-TTGGCTAAACCGCTCGATAAGATTTTC 451 Query 23904 GTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 23963 ||| || |||||||||||||| || || |||||||| || || ||| ||| || Sbjct 450 CAAAACTATCCCATCACTAGCAGCGAAAAATGCAAGAACGTAAGATAGAAAGCGTCGCTC 391 Query 23964 ATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGT 24023 | | | | ||||||| | || ||||| || ||||||||||| || ||||| Sbjct 390 TCCCGGCTTAAGTGAATTCCAATGAGGAAAGTCTTTAGACAAATCAACTTCCTCTACTGT 331 Query 24024 CCAAAAACTTGCCAAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAA 24083 ||| || |||| || |||||| | | |||||| ||| || | || ||||| Sbjct 330 CCAGAAGGAAGCCACAGCTTTCTTATAGAATTTCCAAATGTCAGGATACTCAATGGGAAA 271 Query 24084 TATTACGAA 24092 ||||| || Sbjct 270 CATTACAAA 262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519425527997200