Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09- 26] 316,398 sequences; 617,344,661 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq157544 96.9 2e-15 >seq157544 Length=1252 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||| |||||||| || | || ||| | || || ||||| || || ||||| Sbjct 1223 TCCTTTTGAATGTTGTAGTCTGACAGAGTGCGACCATCCTCTAGCTGTTTGCCTGCAAAA 1164 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 || | |||||||||||| | || | || ||||| ||| | | || |||| | || Sbjct 1163 ATTAGACGCTGCTGATCCGGTGGGATGCCCTCCTTATCC-TGAATTTTAGCTTTCACATT 1105 Query 44267 C-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||| || ||| || || ||||| | || || |||||||| || |||||||| || Sbjct 1104 CTCTATCGTATCGCTCGACTCAACCTCGAGTGTGATAGTCTTTCCAGTAAGGGTCTTTAC 1045 Query 44326 GAAGATTTGCAT 44337 ||| |||||||| Sbjct 1044 GAATATTTGCAT 1033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358602240793566