Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Protopolystoma_20xenopodis_20[genbank_20GCA_5F000950455.1_202014-09-
26] 316,398 sequences; 617,344,661 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq157544 113 4e-20
seq277908 84.2 2e-11
>seq157544
Length=1252
Score = 113 bits (124), Expect = 4e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704
||||| | || ||||| || || ||||| |||||||| ||||| || || |||||
Sbjct 1250 AGACGGAGGACAAGATGTAGAGTTGATTCCTTTTGAATGTTGTAGTCTGACAGAGTGCGA 1191
Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764
| || || ||||| ||||| || || || || ||||| || |||| || | || ||||
Sbjct 1190 CCATCCTCTAGCTGTTTGCCTGCAAAAATTAGACGCTGCTGATCCGGTGGGATGCCCTCC 1131
Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823
|| ||| ||| |||| |||| || | | || ||||||||||| ||||| | ||
Sbjct 1130 TTATCC-TGAATTTTAGCTTTCACATTCTCTATCGTATCGCTCGACTCAACCTCGAGTGT 1072
Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || || ||||||||||| || |||||
Sbjct 1071 GATAGTCTTTCCAGTAAGGGTCTTTACGAATATTTGCAT 1033
>seq277908
Length=620
Score = 84.2 bits (92), Expect = 2e-11
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||||| || |||||||||||||||||||||||| |||||||| |||| ||
Sbjct 540 ACAAGATGCAAGGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTGCGTCCGTCCTCC 599
Query 41714 AGCTGCTTGCCGGCGAATATC 41734
|| ||||| || |||||||||
Sbjct 600 AGTTGCTTTCCTGCGAATATC 620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 460475599237600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |