Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1399 100 4e-16 >seq1399 Length=61108 Score = 100 bits (110), Expect = 4e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 70339 GGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCA 70398 ||| || ||||| ||||| |||||||||||||||||| | | | | ||||| ||||| Sbjct 22371 GGGTCTGGGTGTGCCCTTCAACATTGCAAGCTATTCTCTCCTAATGTTGATGATAGCTCA 22312 Query 70399 CATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTT 70458 |||||| || |||| || || ||||| ||||| ||||||||| ||||||||| Sbjct 22311 CATTACGGGATTGAAGCCGGGTGAATTCGTTCACACAATTGGCGACTGTCACGTGTACAC 22252 Query 70459 AAATCACATCGAGCCATTAAAGG 70481 ||||||| ||| | ||| ||| Sbjct 22251 CAATCACAAGGAGGCCTTAGAGG 22229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740533251759280