Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq7809 82.4 6e-11 >seq7809 Length=21078 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||| | ||| |||||||| ||||| || ||||||||||| | || ||| || Sbjct 14045 CACTAGATGCAGTGTAGACTCTTTCTGAATGTTGTAATCAGAGAGCGTGCGGCCATCCTC 13986 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 | |||||| || || | || || || |||||||| ||| | ||||| ||||| Sbjct 13985 GAGTTGTTTACCGGCGAAGATTAGTCTTTGTTGATCTGGGGGGATTCCTTCCTTGTCCTG 13926 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 ||||| ||||| | ||| || |||| || || || | ||||| ||||| Sbjct 13925 GATTTTGGCCTTCACATTCTCAATCGAGTCGCTGGGCTCAACCTCTAGAGTAATTGTTTT 13866 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| |||||||| ||||| ||||| ||||| Sbjct 13865 GCCTGTCAACGTCTTGACGAAAATCTGCAT 13836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419296853262618