Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1093 86.0 3e-12 >seq1093 Length=67552 Score = 86.0 bits (94), Expect = 3e-12 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct 63732 GGCTCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTACCCGG 63791 Query 11528 CCGT 11531 |||| Sbjct 63792 CCGT 63795 Score = 86.0 bits (94), Expect = 3e-12 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 || ||||||| ||||| |||||||||||||||||||||||| ||||||||||||| || Sbjct 66662 GGCTCGAACCCTCGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTACCCGG 66603 Query 11528 CCGT 11531 |||| Sbjct 66602 CCGT 66599 Lambda K H 0.641 0.410 0.924 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261310252829128