Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq7809 86.0 5e-12 >seq7809 Length=21078 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| ||||| ||| | || || ||||| ||||| | || ||| ||||| Sbjct 13836 ATGCAGATTTTCGTCAAGACGTTGACAGGCAAAACAATTACTCTAGAGGTTGAGCCCAGC 13895 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| | ||| | || || ||||| || || ||||| ||||| ||||| Sbjct 13896 GACTCGATTGAGAATGTGAAGGCCAAAATCCAGGACAAGGAAGGAATCCCCCCAGATCAA 13955 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 |||||||| || | || || |||||| | || |||| | || | | ||||| ||| Sbjct 13956 CAAAGACTAATCTTCGCCGGTAAACAACTCGAGGATGGCCGCACGCTCTCTGATTACAAC 14015 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 ||||| ||||||||||| | ||| | ||| Sbjct 14016 ATTCAGAAAGAGTCTACACTGCATCTAGTG 14045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425049669661360