Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq15210 93.3 3e-14 >seq15210 Length=8810 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 |||||||||||| | ||| | |||||||| | ||||| || ||||||||||| || ||| Sbjct 1422 GATAAAGAGGGTATCCCTCCAGACCAACAGCGGCTTATATTCGCTGGCAAACAGCTCGAA 1481 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||| | ||| || | ||||| |||||||| ||||| || ||||| || |||| Sbjct 1482 GATGGACGTACTCTGTCGGATTATAATATTCAAAAGGAGTCCACTCTACACCTGGT 1537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357876984129412