Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq6944 102 1e-16 >seq6944 Length=23626 Score = 102 bits (112), Expect = 1e-16 Identities = 115/153 (75%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 47937 TGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAA 47996 ||| || || || ||||| || ||||||||||| || || | |||| |||||||||||| Sbjct 3134 TGCCCTGGTTATTTTACGCGTAACAAAAGTTTCGCCCCGGCGTGGACTTTCATGATTAAA 3075 Query 47997 AAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTA 48056 | || ||| | || |||||||| || || | ||||||||| || || |||||||| Sbjct 3074 TAAGATTCCATTGCATGCATACATGCCATAGGCTTCACGATAATTTACAACGATCCAGTA 3015 Query 48057 CCCATAGAGTTTTGCAACACCATAAGGAGAACG 48089 | ||||||||||| || | | |||||||| Sbjct 3014 AGCGTAGAGTTTTGC-GCAACCTGTGGAGAACG 2983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665022081986960