Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq15210 104 4e-17 >seq15210 Length=8810 Score = 104 bits (114), Expect = 4e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || ||||| || | || | ||| || ||||||||| || || | || | ||| Sbjct 1540 AGGACCAGGTGTAGAGTGGACTCCTTTTGAATATTATAATCCGACAGAGTACGTCCATCT 1481 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | ||||| || || || || | | |||||| || ||||| || || ||||||||| Sbjct 1480 TCGAGCTGTTTGCCAGCGAATATAAGCCGCTGTTGGTCTGGAGGGATACCCTCTTTATCT 1421 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 || || |||| |||| ||| || | || |||| |||||| || || |||||||| Sbjct 1420 TGAATCTTGGCCTTTACATTCTCGATGGAGTCCGAAGGCTCAACCTCGAGGGTTATAGTC 1361 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || |||||||| ||||| Sbjct 1360 TTCCCTGTGAGGGTCTTGACAAATATCTGCAT 1329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899015892780960