Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7809 100 3e-16 >seq7809 Length=21078 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| || ||||| || || ||| |||| || | ||||| ||| | | Sbjct 13151 CATGCAGATCTTTGTGAAGACATTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTAG 13210 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||| | || ||| | || ||| ||||| || |||||||| || ||||| || || Sbjct 13211 CGACTCGATTGAGAATGTCAAAGCTAAAATCCAGGACAAAGAGGGAATCCCGCCGGACCA 13270 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || |||| |||| | ||||||||||||||||||| | | | ||| ||||| Sbjct 13271 ACAGCGACTGATTTTTGCTGGCAAACAACTCGAAGATGGCCGCACCCTTTCCGACTACAA 13330 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||||||||| || || ||| | ||| | || || Sbjct 13331 TATTCAAAAGGAGTCGACCCTCCATCTTGTCTT 13363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444778505376960