Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistocephalus_20solidus_20[genbank_20GCA_5F000951495.1_202014-09- 25] 56,778 sequences; 539,424,504 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq14157 93.3 6e-13 >seq14157 Length=9876 Score = 93.3 bits (102), Expect = 6e-13 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028 ||||||| ||||||||||| || || |||||||| |||| | |||| | ||| | Sbjct 1257 CCATGTCCATCATGAACTCTTTCGTGAACGACATCTTCGAGAGAATCGCAGCGGAGTCTA 1316 Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088 | ||||| | | || ||||||| || || || | ||||||||||| |||| Sbjct 1317 GCCGCCTCTCTCACTACAACAAGAAGTCGACTATTACCAGCAGAGAGATCCAGACTGCCG 1376 Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | ||| || ||| || || ||||||| ||||||||||| |||||||||| Sbjct 1377 TTAGGCTGCTCTTGCCTGGTGAGCTGGCCAAACACGCCGTCTCTGAGGGCACCA 1430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7172334857542036