Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq2618 87.8 1e-12 >seq2618 Length=24172 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| | || ||| | ||||| ||||| || ||| ||| || || || Sbjct 20719 ATGCAGATTTTCGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCTGCT 20778 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||| |||||| ||||||||||| | || ||| ||| Sbjct 20779 GATACAATAGAAGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGACCAA 20838 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || || ||||| ||||||||| |||||||| |||| | |||| || ||| Sbjct 20839 CAACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTATAAT 20898 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 || || |||||||| || ||||| Sbjct 20899 ATACAGAAGGAATCAACACTTCA 20921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410495703917960