Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq9656 109 4e-19 >seq9656 Length=10280 Score = 109 bits (120), Expect = 4e-19 Identities = 98/122 (80%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 20485 GATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATT 20544 |||| ||| || ||||| || |||||||||||||||||||| | | || ||||||||| Sbjct 285 GATA-GGGTCTTGGTGTACCGTTCAATATTGCAAGTTATGCTTTATTAACATATATGATT 343 Query 20545 GCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATT 20604 || ||| |||| | ||||||| | ||||| || || ||||| || || || ||||||||| Sbjct 344 GCTCATATTACTGGTTTAAAACCTGGTGAGTTCGTTCACACAATTGGCGATGCGCATATT 403 Query 20605 TA 20606 || Sbjct 404 TA 405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398891415592300