Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq2601 98.7 7e-16 >seq2601 Length=24241 Score = 98.7 bits (108), Expect = 7e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| ||||| || || || ||||||||||| ||||| ||||| |||| | |||||||| Sbjct 23791 CATCTTCCAACTGCTTACCAGCAAATATCAAACGTTGTTGGTCAGGAGGAATACCTTCTT 23850 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 | ||| ||| || || || | ||| |||||| ||||| || || | ||||| Sbjct 23851 TGTCTTGAATCTTCGCCTTCACATTCTCAATAGTATCACTAGGCTCAACCTCCAACGTAA 23910 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || || || || || ||||| || ||||||||||| Sbjct 23911 TCGTCTTTCCTGTCAACGTCTTTACGAATATTTGCAT 23947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354517563540720