Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2618 170 4e-37 >seq2618 Length=24172 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||| ||||| ||||| ||||||||||| || ||||||| || ||| Sbjct 20930 AGGACAAGATGAAGTGTTGATTCCTTCTGTATATTATAGTCGGAAAGAGTTCGTCCATCT 20871 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || |||||||| |||||||||||||| | ||||| || || || || ||||||||||| Sbjct 20870 TCCAGTTGTTTGCCAGCAAAAATTAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTATCT 20811 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || || || || ||||| ||||| ||| || || ||||| || ||||| Sbjct 20810 TGAATTTTCGCCTTAACTGCTTCTATTGTATCAGCAGGCTCAACTTCTAGGGTTATAGTT 20751 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || |||||||| || || || |||||||| Sbjct 20750 TTTCCCGTAAGTGTCTTCACGAAAATCTGCAT 20719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150511197159120