Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2601 109 5e-19 >seq2601 Length=24241 Score = 109 bits (120), Expect = 5e-19 Identities = 146/199 (73%), Gaps = 3/199 (2%) Strand=Plus/Minus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 |||| |||||||||||| |||||||| ||||| || || | || || | || || ||| Sbjct 23952 GGAA-AATGCAAATATTCGTAAAGACGTTGACAGGAAAGACGATTACGTTGGAGGTTGAG 23894 Query 25053 TCGTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 | ||| ||||| ||| ||||| | || | ||| ||||||||||| ||||| || Sbjct 23893 CCTAGTGATACTATTGAGAATGTGAAGGCGAAGATTCAA-GACAAAGAAGGTATTCCTCC 23835 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||||||| || | || ||||| || || || || ||||||| || ||| || || Sbjct 23834 TGACCAACAACGTTTGATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTCTGA 23775 Query 25172 TTACAATATTCAAAAAGAA 25190 ||||| || || |||||| Sbjct 23774 CTACAACATCCAGAAAGAA 23756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433010389534100