Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2601 100 2e-16 seq2618 87.8 2e-12 >seq2601 Length=24241 Score = 100 bits (110), Expect = 2e-16 Identities = 144/202 (71%), Gaps = 1/202 (0%) Strand=Plus/Minus Query 22209 ATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGT 22268 ||||| ||| |||||||| || || || || || || || || ||| | || | || || Sbjct 23956 ATTTGGAAA-ATGCAAATATTCGTAAAGACGTTGACAGGAAAGACGATTACGTTGGAGGT 23898 Query 22269 GGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCC 22328 || | | ||||| | || || | || || ||||||||||| || |||||||| Sbjct 23897 TGAGCCTAGTGATACTATTGAGAATGTGAAGGCGAAGATTCAAGACAAAGAAGGTATTCC 23838 Query 22329 ACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTC 22388 || || ||||||||| | |||||||| || || ||||| || ||| || || | || Sbjct 23837 TCCTGACCAACAACGTTTGATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGTC 23778 Query 22389 CGATTACAACATTCAAAAAGAA 22410 || |||||||| || |||||| Sbjct 23777 TGACTACAACATCCAGAAAGAA 23756 >seq2618 Length=24172 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || || || | || || ||||| | || || ||||| || | | Sbjct 20718 GATGCAGATTTTCGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCTGC 20777 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || | | || ||||||||||| || || || || ||||| || || Sbjct 20778 TGATACAATAGAAGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGACCA 20837 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||||||||| || ||||| |||||||| | || ||| || || | ||||| || || Sbjct 20838 ACAACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTATAA 20897 Query 22398 CATTCAAAAAGAATCCAC 22415 || || || ||||| || Sbjct 20898 TATACAGAAGGAATCAAC 20915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419420357739100