Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2601 109 5e-19 >seq2601 Length=24241 Score = 109 bits (120), Expect = 5e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 |||||| || |||||||| || | | || || | ||||| | |||||| || ||| | Sbjct 23756 TTCTTTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAACTGCTTACCAGCAAA 23815 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAAC 64371 || | || || ||||| |||||||| |||||||| ||||| || || ||| ||| Sbjct 23816 TATCAAACGTTGTTGGTCAGGAGGAATACCTTCTTTGTCTTGAATCTTCGCCTTCACATT 23875 Query 64372 CTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTAC 64431 ||| | ||||||| | || || || | || | ||||| || ||||| || ||||| Sbjct 23876 CTCAATAGTATCACTAGGCTCAACCTCCAACGTAATCGTCTTTCCTGTCAACGTCTTTAC 23935 Query 64432 GAAAATTTGCATTTT 64446 ||| ||||||||||| Sbjct 23936 GAATATTTGCATTTT 23950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499269192021600