Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2618 87.8 2e-12 >seq2618 Length=24172 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| || || || |||||| | ||| || || || |||||||| || | Sbjct 20914 TTGATTCCTTCTGTATATTATAGTCGGAAAGAGTTCGTCCATCTTCCAGTTGTTTGCCAG 20855 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | | |||||||| |||||||| || || || |||||||| || ||| |||| | ||| Sbjct 20854 CAAAAATTAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTATCT-TGAATTTTCGCCTTA 20796 Query 138539 ATTG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 | || ||| | || || | | ||| || || | || | ||||| || || || || Sbjct 20795 ACTGCTTCTATTGTATCAGCAGGCTCAACTTCTAGGGTTATAGTTTTTCCCGTAAGTGTC 20736 Query 138598 TTTACAAAAATCTGCAT 138614 || || ||||||||||| Sbjct 20735 TTCACGAAAATCTGCAT 20719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495889334740800