Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2618 120 2e-22 seq2601 113 4e-20 >seq2618 Length=24172 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 |||||| || ||||| || |||||||| || |||| | ||||| |||| |||| ||| Sbjct 20922 ATGAAGTGTTGATTCCTTCTGTATATTATAGTCGGAAAGAGTTCGTCCATCTTCCAGTTG 20863 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 || || ||||| || | ||| ||||| || || || ||||||||||||||||||||||| Sbjct 20862 TTTGCCAGCAAAAATTAGACGTTGTTGGTCTGGTGGGATGCCTTCTTTATCTTGAATTTT 20803 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || || ||||| || |||| | || ||||| || || | ||||| || || Sbjct 20802 CGCCTTAACTGCTTCTATTGTATCAGCAGGCTCAACTTCTAGGGTTATAGTTTTTCCCGT 20743 Query 101446 TAAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||||||| Sbjct 20742 AAGTGTCTTCACGAAAATCTGCAT 20719 >seq2601 Length=24241 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337 |||||| || || ||||| || | | ||| | |||| ||||| |||||||| ||||| Sbjct 23756 TTCTTTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAACTGCTTACCAGCAAA 23815 Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397 ||||||||| ||||| || || ||||| |||||||| |||||||| || || ||| | Sbjct 23816 TATCAAACGTTGTTGGTCAGGAGGAATACCTTCTTTGTCTTGAATCTTCGCCTTCACATT 23875 Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457 || | ||| ||| | || || || | || | ||| || || || || || ||||| Sbjct 23876 CTCAATAGTATCACTAGGCTCAACCTCCAACGTAATCGTCTTTCCTGTCAACGTCTTTAC 23935 Query 101458 AAATATCTGCAT 101469 ||||| ||||| Sbjct 23936 GAATATTTGCAT 23947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395987945269980