Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq16689 105 8e-18 >seq16689 Length=5739 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 139259 TAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTG 139318 || ||| || | |||||||| |||||||||| ||| |||||| || || | |||||| Sbjct 2078 TAATCCTTCCGGCCCATGATAAACTGCATAGAAAGCAGCCATATTAGCAAGTAATGCTTG 2019 Query 139319 TGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAG 139378 ||||||||||||||||| || ||||| ||||| | |||||| || || | ||||||| Sbjct 2018 AGCTGTGCAGATGTTACTTGTGGCTTTATCTCTACGAATATGTTGTTCCCGCGTTTGTAA 1959 Query 139379 TGCTAATCTGTATGCAGG 139396 || | || || ||||| Sbjct 1958 GGCAAGTCGATACGCAGG 1941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578563137952800