Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2601 95.1 2e-14 seq2618 93.3 7e-14 >seq2601 Length=24241 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| |||| || || |||||||| || ||||| | || || || | || | Sbjct 23946 TGCAAATATTCGTAAAGACGTTGACAGGAAAGACGATTACGTTGGAGGTTGAGCCTAGTG 23887 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| | ||||| || || || ||| |||||||| ||||| || || |||| Sbjct 23886 ATACTATTGAGAATGTGAAGGCGAAGATTCAAGACAAAGAAGGTATTCCTCCTGACCAAC 23827 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 || | | || ||||| ||||| || || || ||| Sbjct 23826 AACGTTTGATATTTGCTGGTAAGCAGTTGGAAGAT 23792 >seq2618 Length=24172 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || ||| | || |||||||| || || | || || || | | | Sbjct 20720 TGCAGATTTTCGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCTGCTG 20779 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || || || || ||||| ||| |||||||||||| ||||| || |||| Sbjct 20780 ATACAATAGAAGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGACCAAC 20839 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || |||||| | || ||| |||| | | || ||||||| Sbjct 20840 AACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTATAATA 20899 Query 146212 TACAAAAAGAATCGAC 146227 |||| || ||||| || Sbjct 20900 TACAGAAGGAATCAAC 20915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785575399408800