Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq42 113 6e-20 >seq42 Length=84351 Score = 113 bits (124), Expect = 6e-20 Identities = 212/307 (69%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 193726 ATGGTTTTGATTATACTGGGTCTGAAACAATGTATTGTGGGTTTACTGGTAAAAGAATTG 193785 |||||| | | |||| || ||||| |||||| ||| |||||||| | || |||| Sbjct 8354 ATGGTTATCAACATACCGGTAATGAAATTATGTATAATGGATTTACTGGAAGAA-AATTA 8412 Query 193786 AAAATA-AAATTTTTATAGGGCCAACTTATTATCATCGTCTTAAACATATGGTTAAGGAT 193844 || | ||||||| |||| |||||||||||||| ||| | |||||||||||| | ||| Sbjct 8413 AATTCACAAATTTTCTTAGGACCAACTTATTATCAACGTTTAAAACATATGGTTGATGAT 8472 Query 193845 AAAATGCATGCTAGAAGTCATGGACAAGT--GACTACTTTACATCGACAACCAAATTGTG 193902 ||||| ||| | | || ||| | || | ||||| |||| ||||| | | Sbjct 8473 AAAATTCATAGTCGTTCTCGTGGTCCTGTTCAAATACTT--AATCGTCAACCTATGGAAG 8530 Query 193903 GTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAGAAAGACTGTATTTTAGTTC 193962 ||||| || | ||| ||| || | ||||| |||||||| || ||| ||| || Sbjct 8531 GTCGTAGTCGTGATGGTGGTCTACGTTTTGGTGAAATGGAACGTGATTGTCAAATAGCTC 8590 Query 193963 ATGGTGCTACTCAATTCTTGAATGAAAGAATGTTTTTGTATTCTGATCCTTTTCAAGTCG 194022 ||||||| | ||||| | |||| | | ||||| | |||||| | |||||| Sbjct 8591 ATGGTGCAGCACAATTTCTACGTGAACGTTTATTTTTTGCTAGTGATCCATATCAAGTGT 8650 Query 194023 ATGTTTG 194029 ||||||| Sbjct 8651 ATGTTTG 8657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634700105239200