Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq42 104 3e-17 >seq42 Length=84351 Score = 104 bits (114), Expect = 3e-17 Identities = 195/284 (69%), Gaps = 2/284 (1%) Strand=Plus/Plus Query 201876 GAAACAATGTATTGTGGTTTTACCGGAAGAAAAATTCAAAGTA-AAATTTTTATAGGCCC 201934 |||| |||||| ||| ||||| ||||||||| || || | ||||||| |||| || Sbjct 8377 GAAATTATGTATAATGGATTTACTGGAAGAAAA-TTAAATTCACAAATTTTCTTAGGACC 8435 Query 201935 AACATACTATCATCGTCTTAAACATATGGTTAAGGATAAAATGCATGCGAGAAGTCATGG 201994 ||| || ||||| ||| | |||||||||||| | |||||||| ||| | || ||| Sbjct 8436 AACTTATTATCAACGTTTAAAACATATGGTTGATGATAAAATTCATAGTCGTTCTCGTGG 8495 Query 201995 TCAAGTAACAACATTACATCGTCAACCAAACTGTGGTCGGTCCCAAGGTGGTGGATTAAG 202054 || || || | | |||||||||| | ||||| | | |||||| || | Sbjct 8496 TCCTGTTCAAATACTTAATCGTCAACCTATGGAAGGTCGTAGTCGTGATGGTGGTCTACG 8555 Query 202055 ATTTGGAGAAATGGAAAAAGATTGTATTTTGGTTCATGGGGCCACACAATTTTTAAATGA 202114 ||||| ||||||||| |||||| | | |||||| || |||||||| || ||| Sbjct 8556 TTTTGGTGAAATGGAACGTGATTGTCAAATAGCTCATGGTGCAGCACAATTTCTACGTGA 8615 Query 202115 AAGAATGTTTTTGTATTCAGATCCTTTTCAAATCGATGTGTGTA 202158 | | | ||||| | ||||| | |||| | |||| |||| Sbjct 8616 ACGTTTATTTTTTGCTAGTGATCCATATCAAGTGTATGTTTGTA 8659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 654787393260000