Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2601 98.7 9e-16 >seq2601 Length=24241 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || || || | || |||| ||||||||| |||||| Sbjct 23757 TCTTTCTGGATGTTGTAGTCAGACAGAGTACGTCCATCTTCCAACTGCTTACCAGCAAAT 23816 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || || ||||| | ||||| | || ||||| ||||| ||||| | | Sbjct 23817 ATCAAACGTTGTTGGTCAGGAGGAATACCTTCTTTGTCTTGAATCTTCGCCTTCACATTC 23876 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || || | || ||||||| ||| ||||| || || ||||| || || || Sbjct 23877 TCAATAGTATCACTAGGCTCAACCTCCAACGTAATCGTCTTTCCTGTCAACGTCTTTACG 23936 Query 35726 AATATCTGCATT 35737 ||||| |||||| Sbjct 23937 AATATTTGCATT 23948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450454715911200