Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schistosoma_20curassoni_20[genbank_20GCA_5F000951415.1_202014-09-25] 60,140 sequences; 344,202,215 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2618 167 3e-36 seq2601 145 9e-30 >seq2618 Length=24172 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| ||||| || || ||||| || || || |||||| | | | Sbjct 20719 ATGCAGATTTTCGTGAAGACACTTACGGGAAAAACTATAACCCTAGAAGTTGAGCCTGCT 20778 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | | | ||||| |||||||| || || || || || || |||||||| Sbjct 20779 GATACAATAGAAGCAGTTAAGGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGACCAA 20838 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||||||||||||||| || ||||| || |||| || || || | ||||||||| Sbjct 20839 CAACGTCTAATTTTTGCTGGCAAACAACTGGAAGATGGACGAACTCTTTCCGACTATAAT 20898 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || |||||||| ||| | |||||||| ||||| Sbjct 20899 ATACAGAAGGAATCAACACTTCATCTTGTCCTCCGTCTTCGTGGTGG 20945 >seq2601 Length=24241 Score = 145 bits (160), Expect = 9e-30 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27393 AAATATTACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGA 27452 ||||||| | ||||||||| || || |||||| | || || ||||| ||||| | || Sbjct 23960 AAATATTTGGAAAATGCAAATATTCGTAAAGACGTTGACAGGAAAGACGATTACGTTGGA 23901 Query 27453 GGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAAT 27512 ||||||| | |||||| |||| ||| ||||||| || ||||| ||||| || || || Sbjct 23900 GGTTGAGCCTAGTGATACTATTGAGAATGTGAAGGCGAAGATTCAAGACAAAGAAGGTAT 23841 Query 27513 TCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 |||||| ||||| || ||| | || |||||||||||||| | || |||| ||||| || Sbjct 23840 TCCTCCTGACCAACAACGTTTGATATTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCT 23781 Query 27573 AGCAGACTATAATGTCCAAAAGGAA 27597 | ||||| || |||| || ||| Sbjct 23780 GTCTGACTACAACATCCAGAAAGAA 23756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569881669156800